Gene omics information

Query gene ID	Zm.4510.1.A1_a_at
Gene name	hypothetical protein LOC100277304
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.4510.1.A1_a_at	CF636202	hypothetical protein LOC100277304	-	6e-1	At5g24879	unknown protein	S.X.	H.G.	Please select
0.25	21.3	Zm.17181.1.S1_at	CK145306	-	-	7e-17	At1g64660	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	S.X.	H.G.	Please select
0.21	15.5	Zm.3396.1.S1_at	AY107588.1	mtN19-like protein	-	2e+1	At5g51830	pfkB-type carbohydrate kinase family protein	S.X.	H.G.	Please select
0.19	12.8	Zm.4820.1.A1_x_at	BG319643	hypothetical protein LOC100192684	-	1e-35	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	S.X.	H.G.	Please select
0.16	9.4	Zm.12955.1.A1_at	CA402356	-	-	6e-1	At3g05741	enzyme inhibitor/ pectinesterase	S.X.	H.G.	Please select
0.11	5.3	Zm.10174.1.S1_at	AY111125.1	-	-	4e+0	At2g47370	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	96.2	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.9	95.7	GSM206291	Upper pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.8	95.5	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.8	95.5	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.8	95.5	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.7	95.4	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.6	95.2	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM206321	Lower pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206297	Lower pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	3e-81	301	Zm.4510.3.S1_at	AI734509	hypothetical protein LOC100193304	-	2e-1	At5g24879	unknown protein	C.G.	S.X.	Please select
0.22	9e-23	107	Zm.7150.1.A1_a_at	AY103659.1	induced stolen tip protein TUB8	-	2e-1	At4g33410	signal peptide peptidase family protein	C.G.	S.X.	Please select
0.22	9e-23	107	Zm.7150.1.A1_x_at	AY103659.1	-	-	2e-1	At4g33410	signal peptide peptidase family protein	C.G.	S.X.	Please select
0.05	5e-15	81	Zm.7150.3.S1_at	AY109249.1	-	-	2e+0	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.12	5e-15	81	Zm.7150.3.A1_a_at	AY109249.1	induced stolen tip protein TUB8	-	2e+0	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.12	5e-15	81	Zm.7150.3.A1_x_at	AY109249.1	-	-	2e+0	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.17	7e-11	67	Zm.7150.4.A1_x_at	BQ487226	hypothetical protein LOC100277393 /// induced stolen tip protein TUB8 /// induced stolen tip protein TUB8	-	3e-2	At5g24580	copper-binding family protein	C.G.	S.X.	Please select
0.02	1e-3	44	Zm.4874.1.A1_at	BU098855	metal ion binding protein	-	2e-1	At2g28660	copper-binding family protein	C.G.	S.X.	Please select
0.02	4e-3	42	Zm.19212.1.A1_at	AY110394.1	-	-	1e-1	At1g06160	ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e-1	36	Arabidopsis thaliana	At5g24879	6240925	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e-3	44	Glycine max	PsAffx.CL536Contig1_at	PsAffx.CL536Contig1	-	-	7e-14	At5g59970	histone H4	C.G.	S.X.	Please select
0.02	7e-2	38	Hordeum vulgare	Contig558_s_at	Contig558	-	-	1e+1	At2g31335	unknown protein	C.G.	S.X.	Please select
0.08	5e-3	44	Oryza sativa	Os09g0484200	AK073885.1	-	Hypothetical protein	8e+0	At3g59370	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	8e-1	36	Populus trichocarpa	PtpAffx.86865.1.A1_at	DN486981	hypothetical protein	-	2e-2	At3g42310	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.34	8e-96	351	Triticum aestivum	Ta.20824.1.S1_at	CA617712	-	-	2e-1	At5g24879	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	34	Vitis vinifera	1614762_at	CF414632	-	-	1e-2	At5g65207	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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