Gene omics information

Query gene ID	Zm.4416.1.S1_at
Gene name	phospholipase C
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.4416.1.S1_at	AY536525.1	phospholipase C	-	5e-3	At5g58700	phosphoinositide-specific phospholipase C family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.14343.1.S1_at	AI947494	-	-	4e-18	At5g03415	DPB	S.X.	H.G.	Please select
0.47	59.9	Zm.3050.2.A1_at	CO523621	ras-related protein Rab-18	-	3e+0	At5g40700	unknown protein	S.X.	H.G.	Please select
0.46	58.4	Zm.730.3.A1_x_at	BM348965	hypothetical protein LOC100193447	-	6e-38	At3g46440	UXS5	S.X.	H.G.	Please select
0.21	15.5	Zm.12394.1.S1_at	AW519964	hypothetical protein LOC100279308	-	2e-8	At2g40550	ETG1 (E2F TARGET GENE 1)	S.X.	H.G.	Please select
0.11	5.3	Zm.6924.1.S1_at	AY105841.1	ubiquitin-protein ligase/ zinc ion binding protein	-	2e+0	At1g50160	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.4	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
6.8	97.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	38	Zm.13814.1.S1_at	AY104654.1	hypothetical protein LOC100273186	-	1e-5	At1g08940	phosphoglycerate/bisphosphoglycerate mutase family protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.901.1.A1_at	AY109251.1	-	-	1e+0	At2g36026	-	C.G.	S.X.	Please select
0.03	5e-1	36	Zm.901.1.S1_at	AY109251.1	-	-	1e+0	At2g36026	-	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.2550.1.S1_at	CF632382	cinnamoyl CoA reductase1	-	2e-1	At1g80820	CCR2 (CINNAMOYL COA REDUCTASE)	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.1690.1.A1_at	CK347441	density-regulated protein	-	4e-17	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.11704.1.A1_at	BM380095	hypothetical protein LOC100278841	-	1e+1	Atmg00450	-	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.831.1.A1_at	AI770541	Hypothetical protein LOC100191667	-	2e-1	At1g21900	emp24/gp25L/p24 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.831.1.S1_at	AI770541	hypothetical protein LOC100191667	-	2e-1	At1g21900	emp24/gp25L/p24 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.1006.1.A1_at	AI881370	-	-	3e+0	At4g34470	ASK12 (ARABIDOPSIS SKP1-LIKE 12)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-3	44	Arabidopsis thaliana	At5g58700	835984	phosphoinositide-specific phospholipase C family protein	F:phospholipase C activity, phosphoinositide phospholipase C activity, phosphoric diester hydrolase activity;P:signal transduction, intracellular signaling cascade, lipid metabolic process;C:plasma membrane;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	3e-8	61	Glycine max	Gma.8433.1.A1_at	U41473.1	phosphoinositide-specific phospholipase C P12	-	1e-9	At2g40116	phosphoinositide-specific phospholipase C family protein	C.G.	S.X.	Please select
0.10	4e-20	99	Hordeum vulgare	Contig24334_at	Contig24334	-	-	3e-1	At3g08510	ATPLC2 (PHOSPHOLIPASE C 2)	C.G.	S.X.	Please select
0.54	0	777	Oryza sativa	OsAffx.20000.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	5e-13	77	Populus trichocarpa	PtpAffx.207752.1.S1_s_at	pmrna15428	hypothetical protein	-	1e-18	At2g40116	phosphoinositide-specific phospholipase C family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.17	3e-47	190	Triticum aestivum	TaAffx.117121.1.S1_at	CA692520	-	-	6e-2	At4g38530	ATPLC1 (ARABIDOPSIS THALIANA PHOSPHOLIPASE C 1)	C.G.	S.X.	Please select
0.04	2e-2	40	Vitis vinifera	1607756_s_at	CF519234	hypothetical protein LOC100241574	-	3e-40	At3g08510	ATPLC2 (PHOSPHOLIPASE C 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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