Gene omics information

Query gene ID Zm.4355.1.A1_at
Gene name seed maturation protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6Zm.4355.1.A1_atCK827466seed maturation protein-2e+0At5g10140FLC (FLOWERING LOCUS C)S.X.H.G.
0.6785.8Zm.2135.1.S1_atCD436684hypothetical protein LOC100217069-4e-26At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)S.X.H.G.
0.5571.6Zm.4814.3.A1_a_atCD440511glutathione transferase5 /// elongation factor 1-beta-2e-10At1g30230elongation factor 1-beta / EF-1-betaS.X.H.G.
0.5065.7Zm.14384.1.A1_atCK144440hypothetical protein LOC100191907-1e-1At3g25850DC1 domain-containing proteinS.X.H.G.
0.5065.7Zm.17097.1.A1_atCO523303--5e+0At4g16610zinc finger (C2H2 type) family proteinS.X.H.G.
0.2928.1Zm.694.1.A1_a_atAW681229hypothetical protein LOC100275466-1e+0At4g31260unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.498.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.898.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.797.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.195.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.795.4GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.695.2GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+034Zm.9562.1.S1_atD88452.1aldehyde oxidase-2-4e-5At5g20960AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)C.G.S.X.
0.011e+034Zm.290.1.S1_atBM079195Rho-related protein from plants 5-9e-37At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)C.G.S.X.
0.011e+034Zm.13811.1.A1_atAY104705.1--2e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.014e+032Zm.9903.1.A1_atBM335103hypothetical protein LOC100273348-3e+0At1g63220C2 domain-containing proteinC.G.S.X.
0.014e+032Zm.5699.1.A1_atBM333318ras-related protein Rab7 /// ras-related protein Rab7-2e-44At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)C.G.S.X.
0.014e+032Zm.3665.1.S1_atD88451.1aldehyde oxidase-4e-2At3g43600AAO2 (ALDEHYDE OXIDASE 2)C.G.S.X.
0.014e+032Zm.3256.1.A1_atCK347684hypothetical protein LOC100277067-3e-6At5g48020unknown proteinC.G.S.X.
0.014e+032Zm.3256.1.A1_a_atCK347684hypothetical protein LOC100277067-3e-6At5g48020unknown proteinC.G.S.X.
0.024e+032Zm.16310.1.S1_atAJ006548hypothetical protein LOC100276764-2e+0At3g19274unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt5g10140830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3 to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---C.G.S.X.
0.155e-240Glycine maxGmaAffx.93319.1.S1_atCF809044--2e-2At3g10915reticulon family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig20672_x_atContig20672--5e+0At5g54430universal stress protein (USP) family proteinC.G.S.X.
0.451e-160567Oryza sativaOs.48943.1.S1_at---0C.G.S.X.
0.043e+034Populus trichocarpaPtpAffx.137381.1.S1_atAJ774366hypothetical protein-5e-4At3g10915reticulon family proteinC.G.S.X.
0.141e-1171Triticum aestivumTa.4214.1.A1_atBJ252415--2e-2At4g37920unknown proteinC.G.S.X.
0.023e+032Vitis vinifera1610860_atCB972633--2e+0At3g49550unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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