CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.4338.1.A1_at

Gene name peroxidase 72

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.68 86.1 Zm.4338.1.A1_at CF638243 peroxidase 72 - 1e-8 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) S.X. H.G.
0.44 55.7 Zm.1574.1.S1_at AY106519.1 - - 6e-20 At2g24320 unknown protein S.X. H.G.
0.43 52.8 Zm.1940.1.S1_at AW507032 - - 5e-1 At4g13615 four F5 protein-related / 4F5 protein-related S.X. H.G.
0.41 49.7 Zm.5985.3.S1_at CF041948 - - 4e-28 At4g16340 SPK1 (SPIKE1) S.X. H.G.
0.40 48.5 Zm.11992.1.A1_at BM382475 - - 3e+0 At5g41614 unknown protein S.X. H.G.
0.39 45.6 Zm.19152.1.S1_at CO531785 - - 5e-8 At4g09570 CPK4 S.X. H.G.
0.36 41.3 ZmAffx.716.1.A1_at AI739804 - - 2e-1 At4g03240 FH (FRATAXIN HOMOLOG) S.X. H.G.
0.35 38.9 Zm.15421.1.S1_at AY107122.1 - - 1e+0 At3g42050 vacuolar ATP synthase subunit H family protein S.X. H.G.
0.34 37.2 Zm.19138.1.S1_at CO525589 hypothetical protein LOC100277966 - 5e-1 At2g46300 - S.X. H.G.
0.33 36.0 Zm.17436.1.A1_at CK347538 - - 4e-1 At2g18970 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.2 98.4 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.9 98.3 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.8 98.1 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.6 98.1 GSM206327 Upper pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.7 97.9 GSM206317 Right pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.7 97.9 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.6 97.9 GSM206311 Left pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.6 97.6 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.4 97.5 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.4 97.5 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 0 636 Zm.4338.2.S1_at AJ401274.1 peroxidase - 9e-4 At4g16270 peroxidase 40 (PER40) (P40) C.G. S.X.
0.21 6e-21 101 Zm.17947.1.A1_at CF626929 - - 4e+0 At4g17690 peroxidase, putative C.G. S.X.
0.04 3e-10 65 Zm.4338.3.A1_at AW000126 - - 3e+0 At5g27170 unknown protein C.G. S.X.
0.04 3e-10 65 Zm.4338.3.S1_at AW000126 - - 3e+0 At5g27170 unknown protein C.G. S.X.
0.03 5e-9 61 Zm.2766.1.A1_at CD998947 peroxidase - 4e-2 At3g21770 peroxidase 30 (PER30) (P30) (PRXR9) C.G. S.X.
0.04 8e-8 57 Zm.2707.1.S1_at BG842199 - - 2e-1 At5g05340 peroxidase, putative C.G. S.X.
0.09 8e-8 57 Zm.16830.1.A1_at CF626857 - - 3e-3 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.08 8e-8 57 Zm.16830.2.S1_at CK348179 - - 5e-3 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.04 2e-5 50 Zm.315.1.A1_at AJ401275.1 peroxidase - 2e-1 At3g03670 peroxidase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-8 61 Arabidopsis thaliana At5g66390 836771 peroxidase 72 (PER72) (P72) (PRXR8) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB - - - C.G. S.X.
0.07 4e-3 44 Glycine max Gma.5971.1.S1_at BQ610718 - - 4e-5 At2g18150 peroxidase, putative C.G. S.X.
0.61 8e-147 519 Hordeum vulgare Contig1860_x_at Contig1860 - - 2e-3 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.61 0 809 Oryza sativa Os01g0263300 AK102117.1 - - 4e-8 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.12 4e-6 54 Populus trichocarpa PtpAffx.18226.1.A1_a_at CV263828 hypothetical protein - 5e-17 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.61 0 896 Triticum aestivum Ta.17515.1.S1_at CA621428 - - 6e+0 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.03 1e-2 40 Vitis vinifera 1610628_at CF213924 hypothetical protein LOC100267732 - 2e-5 At5g42180 peroxidase 64 (PER64) (P64) (PRXR4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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