Gene omics information

Query gene ID Zm.4308.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.4308.1.A1_atAY112093.1--1e-1At1g08390nucleic acid bindingS.X.H.G.
0.6785.8ZmAffx.871.1.A1_atAI770769--8e-1At1g69760unknown proteinS.X.H.G.
0.6077.8Zm.6234.2.S1_atAI881460--8e-7At2g30110ATUBA1S.X.H.G.
0.6077.8Zm.1628.2.A1_atAW787801--3e-1At1g08465YAB2 (YABBY2)S.X.H.G.
0.5976.1Zm.2868.1.A1_atCO521622--1e+0At3g28560-S.X.H.G.
0.5369.1Zm.17260.1.A1_atCK145375hypothetical protein LOC100277879-1e+0At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeS.X.H.G.
0.3538.9ZmAffx.1173.1.S1_atAW787668--3e+0At3g47800aldose 1-epimerase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.998.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.598.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.398.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.497.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Zm.6981.1.A1_atAI065915--2e-1At1g34065SAMC2 (S-adenosylmethionine carrier 2)C.G.S.X.
0.023e+032Zm.7731.1.A1_atAI612464--4e-1At3g46820TOPP5C.G.S.X.
0.013e+032Zm.4374.1.S1_atBG841590hypothetical protein LOC100276001-7e-11At1g11200unknown proteinC.G.S.X.
0.023e+032Zm.3997.1.A1_atAY109998.1cyclin-dependent kinases regulatory subunit-6e-28At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)C.G.S.X.
0.023e+032Zm.16468.1.A1_atBG837965HSP70 protein-7e-22At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)C.G.S.X.
0.023e+032Zm.16468.1.S1_atCD999619hypothetical protein LOC100277908-2e-13At3g09440heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)C.G.S.X.
0.013e+032Zm.15903.2.A1_atBM266872--2e-11At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.013e+032Zm.15903.1.S1_atL77912.1phenylalanine ammonia-lyase-2e-14At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.023e+032Zm.12592.1.S1_atCA830809--2e-5At3g12580HSP70 (heat shock protein 70)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-138Arabidopsis thalianaAt1g08390837359nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MP---C.G.S.X.
0.032e+034Glycine maxGmaAffx.64861.1.S1_atBM954933--3e-3At3g63230unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareHB30O24r_atHB30O24r--4e+0At4g05095unknown proteinC.G.S.X.
0.194e-963Oryza sativaOs03g0684300AK102497.1-Conserved hypothetical protein7e+0At2g39540gibberellin-regulated family proteinC.G.S.X.
0.039e+032Populus trichocarpaPtpAffx.220761.1.S1_atpmrna37183hypothetical protein-2e+0At5g58330malate dehydrogenase (NADP), chloroplast, putativeC.G.S.X.
0.111e-1997Triticum aestivumTaAffx.58638.1.S1_atCA617698--4e+0At1g12805nucleotide bindingC.G.S.X.
0.022e+032Vitis vinifera1618609_s_atBQ800563hypothetical protein LOC100249094-1e+0At4g28556RIC7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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