CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.4273.2.A1_at

Gene name heat shock 70 kDa protein 4

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.4273.2.A1_at AI665197 heat shock 70 kDa protein 4 - 3e-10 At1g79920 ATP binding S.X. H.G.
0.55 71.6 Zm.354.1.S1_at AY505017.1 glossy1 - 7e-2 At4g19150 ankyrin repeat family protein S.X. H.G.
0.27 24.6 Zm.1546.2.S1_x_at CB411210 hypothetical protein LOC100278775 - 3e-4 At1g15270 - S.X. H.G.
0.27 24.6 Zm.19145.1.A1_at CA404085 ATPase1 - 2e-59 At1g75630 AVA-P4 S.X. H.G.
0.21 15.5 Zm.10842.1.S1_a_at AF493800.1 DRE binding factor 1 - 1e-4 At2g22200 AP2 domain-containing transcription factor S.X. H.G.
0.16 9.4 Zm.19063.1.S1_at CO532335 hypothetical protein LOC100274479 - 2e-1 At5g58140 PHOT2 (PHOTOTROPIN 2) S.X. H.G.
0.12 5.9 Zm.13198.2.A1_at CA400950 - - 4e+0 At3g43432 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 96.7 GSM202277 Mo17 11-day seedling aerial tissue biological replicate 1 GSE8174 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
4.8 96.6 GSM202303 Mo17 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.6 96.4 GSM206326 Upper pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM202297 Mo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2 96.0 GSM206332 Lower pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM202290 Mo17 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.0 95.8 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.7 95.4 GSM202280 B73xMo17 11-day seedling aerial tissue biological replicate 1 GSE8174 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.7 95.4 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.54 2e-151 535 Zm.4273.1.A1_at CF626426 hypothetical protein LOC100217188 - 6e-15 At1g79930 HSP91 C.G. S.X.
0.16 6e-53 208 Zm.16261.1.A1_at CA400028 - - 2e-3 At1g79920 ATP binding C.G. S.X.
0.02 8e-6 52 Zm.3912.1.A1_at CB351314 - - 1e-1 At1g47820 unknown protein C.G. S.X.
0.01 1e-1 38 Zm.16855.1.A1_at AF036949.1 liguleless2 - 1e-3 At5g06950 AHBP-1B C.G. S.X.
0.02 5e-1 36 Zm.8229.1.S1_at BM073362 hypothetical protein LOC100192960 /// thioredoxin - 5e-1 At3g06730 thioredoxin family protein C.G. S.X.
0.01 5e-1 36 Zm.11891.1.A1_at BM381583 helix-loop-helix DNA-binding domain containing protein - 6e-2 At5g42420 transporter-related C.G. S.X.
0.01 2e+0 34 Zm.8642.1.S1_at BM075042 - - 5e-15 At1g53040 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.4347.1.A1_at CD434952 - - 1e-2 At3g60340 palmitoyl protein thioesterase family protein C.G. S.X.
0.01 2e+0 34 Zm.19097.1.A1_at CO519732 hypothetical protein LOC100216571 - 1e+0 At5g55240 caleosin-related family protein / embryo-specific protein, putative C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-10 67 Arabidopsis thaliana At1g79920 844332 ATP binding F:ATP binding;P:unknown;C:cell wall, plasma membrane;BOMFPAV - - - C.G. S.X.
0.10 2e-12 75 Glycine max Gma.5708.1.S1_at BF219541 - - 5e-14 At1g79920 ATP binding C.G. S.X.
0.44 1e-60 234 Hordeum vulgare Contig2820_at Contig2820 - - 2e-7 At1g79920 ATP binding C.G. S.X.
0.38 1e-72 276 Oryza sativa Os01g0180800 AK059244.1 - Heat shock protein Hsp70 family protein 1e-25 At1g79930 HSP91 C.G. S.X.
0.08 4e-10 67 Populus trichocarpa PtpAffx.202936.1.S1_x_at pmrna5810 hypothetical protein - 1e-47 At1g79930 HSP91 C.G. S.X.
0.45 4e-102 373 Triticum aestivum Ta.2706.3.S1_at CK205780 - - 2e-15 At1g79920 ATP binding C.G. S.X.
0.07 3e-7 56 Vitis vinifera 1614594_at CF518547 - - 7e-7 At1g79920 ATP binding C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage