Gene omics information

Query gene ID	Zm.4194.1.A1_at
Gene name	hypothetical protein LOC100276018
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.4194.1.A1_at	AI861230	hypothetical protein LOC100276018	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	S.X.	H.G.	Please select
0.80	94.0	Zm.14617.1.A1_at	BM080453	Hypothetical protein LOC100191188	-	2e+0	At2g33130	RALFL18 (ralf-like 18)	S.X.	H.G.	Please select
0.80	94.0	Zm.13975.1.A1_at	CK985455	carbonyl reductase 3	-	6e-1	At4g20880	ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)	S.X.	H.G.	Please select
0.77	92.1	Zm.4853.1.S1_at	CD439703	-	-	2e-1	At2g45070	SEC61 BETA	S.X.	H.G.	Please select
0.73	89.9	ZmAffx.714.1.S1_at	AI739758	-	-	1e+1	At5g66930	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.12300.1.A1_at	CF626520	ruBisCO large subunit-binding protein subunit alpha	-	1e-37	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.4	99.8	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
25.6	99.6	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
22.5	99.5	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
20.4	99.3	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
20.4	99.3	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
19.6	99.3	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
16.5	99.0	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
15.5	99.0	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
14.7	98.9	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
14.4	98.9	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-5	50	ZmAffx.832.1.A1_at	AI770560	-	-	5e-2	At5g51990	CBF4 (C- REPEAT-BINDING FACTOR 4)	C.G.	S.X.	Please select
0.03	2e-5	50	ZmAffx.832.1.S1_at	AI770560	hypothetical protein LOC100274340	-	5e-2	At5g51990	CBF4 (C- REPEAT-BINDING FACTOR 4)	C.G.	S.X.	Please select
0.02	5e-3	42	Zm.5674.1.S1_at	BM380629	hypothetical protein LOC100194231	-	1e+1	At3g24516	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	ZmAffx.994.1.A1_at	AI855283	-	-	3e+0	At5g11360	-	C.G.	S.X.	Please select
0.03	3e-1	36	ZmAffx.994.1.S1_at	AI855283	sphingosine-1-phosphate lyase	-	3e+0	At5g11360	-	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.19233.1.A1_at	CO517776	hypothetical protein LOC100192462	-	4e-7	At1g09750	chloroplast nucleoid DNA-binding protein-related	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.17522.1.S1_at	CK144399	-	-	8e-1	At2g02180	TOM3	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.15084.1.A1_at	BM350611	-	-	6e-2	At1g62240	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.10008.1.A1_at	BM332132	hypothetical protein LOC100276626	-	7e-3	At1g02816	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	34	Arabidopsis thaliana	At1g71180	843458	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	36	Glycine max	GmaAffx.88725.1.A1_at	CK605999	-	-	1e-18	At4g29390	40S ribosomal protein S30 (RPS30B)	C.G.	S.X.	Please select
0.02	1e+0	34	Hordeum vulgare	HW03P01u_at	HW03P01u	-	-	1e+1	At5g13190	-	C.G.	S.X.	Please select
0.23	7e-30	133	Oryza sativa	Os09g0459200	AK110733.1	-	Conserved hypothetical protein	6e-1	At5g08170	EMB1873 (EMBRYO DEFECTIVE 1873)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e-1	38	Populus trichocarpa	PtpAffx.63184.1.A1_s_at	CV263226	hypothetical protein	-	5e-25	At1g29250	nucleic acid binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e-1	38	Triticum aestivum	TaAffx.119583.1.S1_at	BJ267382	-	-	4e+0	At5g61670	-	C.G.	S.X.	Please select
0.02	8e-1	34	Vitis vinifera	1608951_at	CF515796	-	-	9e-1	At5g46090	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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