Gene omics information

Query gene ID Zm.4097.1.A1_at
Gene name hypothetical protein LOC100280288
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6381.1Zm.4097.1.A1_atBG266571hypothetical protein LOC100280288-3e+0At5g48890transcription factorS.X.H.G.
0.5976.1Zm.3613.1.A1_atBG841007hypothetical protein LOC100273532-4e-24At5g10540peptidase M3 family protein / thimet oligopeptidase family proteinS.X.H.G.
0.5875.1Zm.10105.1.A1_atBM379807--5e+0At4g11870unknown proteinS.X.H.G.
0.5674.4Zm.1937.1.S1_atCN845484hypothetical protein LOC100277662-5e+0At3g50800unknown proteinS.X.H.G.
0.5267.3Zm.19001.1.A1_atAY108422.1--3e-6At3g01540DRH1 (DEAD BOX RNA HELICASE 1)S.X.H.G.
0.5267.3Zm.6015.1.A1_atAI666198--1e+0At5g24570unknown proteinS.X.H.G.
0.5166.4Zm.4467.1.S1_a_atAW054142hypothetical protein LOC100193777-1e-5At1g36280adenylosuccinate lyase, putative / adenylosuccinase, putativeS.X.H.G.
0.4961.9Zm.564.1.S1_a_atAF244704.1glutathione S-transferase GST 39-3e-2At2g36640ATECP63 (EMBRYONIC CELL PROTEIN 63)S.X.H.G.
0.4861.3Zm.17556.1.S1_atCK369094hypothetical protein LOC100191272-1e-4At5g36700PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)S.X.H.G.
0.4861.3Zm.4164.4.A1_a_atBM267227--3e+1At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.796.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.296.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.195.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.695.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.595.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.595.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.494.9GSM202318B73xMo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.394.7GSM206288Upper pulvinus 2 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.294.5GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+032Zm.7107.1.S1_atCF051037RNA-binding protein 25-4e-2At5g19960RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.022e+032Zm.5851.4.A1_atCF042267hypothetical protein LOC100272411-6e-1At5g02120OHP (ONE HELIX PROTEIN)C.G.S.X.
0.026e+030Zm.8331.1.A1_atBM349811--9e-3At1g72430auxin-responsive protein-relatedC.G.S.X.
0.026e+030Zm.7755.1.A1_atCN845074hypothetical protein LOC100275494-3e-18At1g16460ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2)C.G.S.X.
0.026e+030Zm.6755.1.A1_a_atCF629886nicotiana lesion-inducing like-2e+0At2g12945unknown proteinC.G.S.X.
0.026e+030Zm.6755.1.A1_atCF629886nicotiana lesion-inducing like-2e+0At2g12945unknown proteinC.G.S.X.
0.016e+030Zm.6559.1.A1_atCF051688--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)C.G.S.X.
0.016e+030Zm.6223.1.A1_atAY108739.1pseudouridylate synthase/ transporter-7e-11At5g14460pseudouridine synthase/ transporterC.G.S.X.
0.026e+030Zm.2735.1.A1_atAW067028hypothetical protein LOC100217013-5e-1At5g65080MAF5 (MADS AFFECTING FLOWERING 5)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt5g48890834947transcription factorF:transcription factor activity;P:regulation of transcription;C:intracellular;P---C.G.S.X.
0.041e+034Glycine maxGma.13091.2.S1_atBU090093--1e-5At5g49940NFU2 (NIFU-LIKE PROTEIN 2)C.G.S.X.
0.047e+030Hordeum vulgareHV_CEb0020I07f2_x_atHV_CEb0020I07f2--2e+0At4g14950unknown proteinC.G.S.X.
0.042e+034Oryza sativaOsAffx.27455.1.S1_at---0C.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.43860.1.A1_atCV255790--3e-4At3g57062unknown proteinC.G.S.X.
0.201e-654Triticum aestivumTaAffx.56961.1.S1_atCA639331--7e-2At1g33400tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.031e+032Vitis vinifera1615192_x_atCF206355.1similar to polyubiquitin-9e-38At5g03240UBQ3 (POLYUBIQUITIN 3)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage