Gene omics information

Query gene ID	Zm.406.2.A1_a_at
Gene name	NADPH producing dehydrogenase of the oxidative pentose phosphate pathway
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.82	94.6	Zm.406.2.A1_a_at	CK348246	NADPH producing dehydrogenase of the oxidative pentose phosphate pathway	-	1e-12	At3g02360	6-phosphogluconate dehydrogenase family protein	S.X.	H.G.	Please select
0.47	59.9	Zm.14498.2.A1_at	AI691791	-	-	2e-4	At1g26770	ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)	S.X.	H.G.	Please select
0.46	58.4	Zm.2935.1.A1_at	BM074799	hypothetical protein LOC100193640	-	1e-3	At3g01950	unknown protein	S.X.	H.G.	Please select
0.43	52.8	Zm.4914.1.S1_at	CD437635	-	-	8e-4	At5g49330	AtMYB111 (myb domain protein 111)	S.X.	H.G.	Please select
0.42	51.3	Zm.9803.1.A1_at	BM339320	-	-	1e+0	At1g64740	TUA1 (ALPHA-1 TUBULIN)	S.X.	H.G.	Please select
0.42	51.3	Zm.10067.1.A1_at	BM349883	-	-	7e-1	At2g18700	ATTPS11	S.X.	H.G.	Please select
0.40	48.5	Zm.6812.1.A1_s_at	AI396472	-	-	5e+0	At4g30880	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.38	44.2	Zm.2220.4.A1_a_at	AY110053.1	Hypothetical protein LOC100216733	-	1e-1	At5g16500	protein kinase family protein	S.X.	H.G.	Please select
0.35	38.9	Zm.5226.1.A1_at	AI615013	-	-	3e+0	At2g03440	nodulin-related	S.X.	H.G.	Please select
0.32	33.4	Zm.2833.1.S1_s_at	AW076206	protein ABIL1	-	2e-1	At3g53670	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.9	95.7	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM323172	Zm_SG200Dpep1_24hpi_III	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.1	94.3	GSM323170	Zm_SG200Dpep1_24hpi_I	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
2.8	93.5	GSM206315	Upper pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.7	93.2	GSM253249	ZM_12h_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.6	92.9	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.6	92.9	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.6	92.9	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.65	0	1364	Zm.506.1.A1_at	AF061838.1	6-phosphogluconate dehydrogenase2	-	5e-55	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.06	2e-34	147	Zm.36.2.S1_a_at	AF461049.1	delta zein structural10	-	9e-2	At2g45110	ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)	C.G.	S.X.	Please select
0.04	3e-11	69	Zm.9008.1.A1_at	AF371265.1	delta zein structural18 /// prolamin /// prolamin	-	2e+0	At5g61680	pectinesterase family protein	C.G.	S.X.	Please select
0.04	3e-11	69	Zm.9008.1.A1_x_at	AF371265.1	delta zein structural18 /// prolamin /// prolamin	-	2e+0	At5g61680	pectinesterase family protein	C.G.	S.X.	Please select
0.04	7e-9	61	Zm.12.1.S1_at	AY047317.1	modified zein precursor	-	4e-1	At1g21930	unknown protein	C.G.	S.X.	Please select
0.03	3e-8	59	Zm.9008.2.S1_at	AI665626	-	-	3e+0	At3g27080	TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)	C.G.	S.X.	Please select
0.03	3e-8	59	Zm.9008.2.A1_a_at	AI665626	delta zein structural18 /// prolamin /// prolamin	-	3e+0	At3g27080	TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)	C.G.	S.X.	Please select
0.03	7e-6	52	Zm.507.1.A1_at	AY108628.1	phosphogluconate dehydrogenase3	-	4e-4	At1g64190	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.8863.1.S1_at	BM332217	-	-	2e-7	At2g03280	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	1e-12	75	Arabidopsis thaliana	At3g02360	821163	6-phosphogluconate dehydrogenase family protein	F:in 6 functions;P:response to salt stress;C:peroxisome;BOMPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.29	5e-34	147	Glycine max	Gma.3145.1.S1_at	BQ610556	-	-	2e-38	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.26	3e-107	389	Hordeum vulgare	Contig2598_s_at	Contig2598	-	-	2e-3	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.68	0	1475	Oryza sativa	Os06g0111500	AF486280.2	-	Cytosolic 6-phosphogluconate dehydrogenase	1e-58	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.28	1e-28	129	Populus trichocarpa	PtpAffx.15840.1.S1_s_at	CV245081	hypothetical protein	-	6e-73	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.62	0	1279	Triticum aestivum	Ta.1683.1.S1_x_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.13	4e-34	145	Vitis vinifera	1616473_at	CF414627	hypothetical protein LOC100246134	-	5e-135	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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