Gene omics information

Query gene ID Zm.405.1.A1_at
Gene name hypothetical LOC541674
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.405.1.A1_atAF037034.2hypothetical LOC541674-2e-1At5g05340peroxidase, putativeS.X.H.G.
0.6077.8Zm.13859.1.S1_atAF439724.1methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 1-1e-12At3g12290tetrahydrofolate dehydrogenase/cyclohydrolase, putativeS.X.H.G.
0.5571.6Zm.7122.1.A1_atAY111472.1--2e+0At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.4048.5Zm.17316.1.A1_atCK369406--4e+0At5g38317LCR58 (Low-molecular-weight cysteine-rich 58)S.X.H.G.
0.3844.2Zm.2952.1.A1_a_atCF629660hypothetical protein LOC100192920-2e-3At3g26680SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)S.X.H.G.
0.3336.0Zm.6076.1.A1_a_atAY111015.1COX VIIa-like protein-3e-1At2g21195unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.7100.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.399.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.199.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.298.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.798.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.997.9GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
5.997.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.482e-101369Zm.1616.1.A1_atBM380022plasma membrane-bound peroxidase 3-1-6e-2At1g14540anionic peroxidase, putativeC.G.S.X.
0.352e-60232Zm.2707.1.S1_atBG842199--2e-1At5g05340peroxidase, putativeC.G.S.X.
0.222e-26119Zm.10660.1.A1_atCF634854Plasma membrane-bound peroxidase 2b-8e-3At5g05340peroxidase, putativeC.G.S.X.
0.072e-1479Zm.16643.1.S1_atCK144844peroxidase 27-3e-3At1g44970peroxidase, putativeC.G.S.X.
0.092e-1169Zm.4894.1.A1_atBM076024--1e+0At5g05340peroxidase, putativeC.G.S.X.
0.081e-963Zm.2505.1.S1_atBG841722hypothetical protein LOC100216859-4e-5At1g44970peroxidase, putativeC.G.S.X.
0.185e-961Zm.9856.1.S1_atBM381423hypothetical protein LOC100272496-4e-2At5g40150peroxidase, putativeC.G.S.X.
0.042e-859Zm.11650.1.A1_atBM379683hypothetical protein LOC100192105-4e+0At2g12405unknown proteinC.G.S.X.
0.068e-857Zm.3573.1.A1_atCF629925peroxidase 54-3e-3At5g06720peroxidase, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Arabidopsis thalianaAt5g05340830416peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBM---C.G.S.X.
0.053e-757Glycine maxGmaAffx.73853.1.S1_atBM177977--8e-3At5g06730peroxidase, putativeC.G.S.X.
0.421e-43176Hordeum vulgareContig2119_atContig2119--9e-9At1g44970peroxidase, putativeC.G.S.X.
0.392e-55218Oryza sativaOs07g0677300D16442.1-Peroxidase2e-4At3g50990electron carrier/ heme binding / peroxidaseC.G.S.X.
0.034e-654Populus trichocarpaPtpAffx.206163.1.S1_atpmrna12232hypothetical protein-5e-13At2g41480electron carrier/ heme binding / peroxidaseC.G.S.X.
0.342e-93343Triticum aestivumTaAffx.85486.1.S1_atCA622309--3e-4At5g05340peroxidase, putativeC.G.S.X.
0.033e+032Vitis vinifera1621609_atAY348574.1class III peroxidase GvPx2b-5e-7At5g64120peroxidase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage