Gene omics information

Query gene ID Zm.4.2.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4352.8Zm.4.2.A1_atCA401225--2e-3At5g11860NLI interacting factor (NIF) family proteinS.X.H.G.
0.5571.6Zm.5436.1.A1_atAI833498--3e+0At3g06470GNS1/SUR4 membrane family proteinS.X.H.G.
0.4455.7Zm.17590.1.A1_atCK144918hypothetical protein LOC100191237-3e-46At1g67280lactoylglutathione lyase, putative / glyoxalase I, putativeS.X.H.G.
0.4048.5Zm.1338.1.A1_atAY107813.1--6e+0At5g15350plastocyanin-like domain-containing proteinS.X.H.G.
0.1912.8Zm.5944.1.A1_atBG874229pyruvate kinase, cytosolic isozyme-2e-97At3g52990pyruvate kinase, putativeS.X.H.G.
0.147.7Zm.10062.1.A1_atBM378648hypothetical protein LOC100280233-4e-4At5g16000NIK1 (NSP-INTERACTING KINASE 1)S.X.H.G.
0.083.4Zm.12574.1.A1_atCD967092hypothetical protein LOC100277061-2e+0At4g33740unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.396.1GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.095.8GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.095.8GSM202322B73x Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.695.2GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.695.2GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.695.2GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.595.1GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.595.1GSM202318B73xMo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.595.1GSM202315B73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.494.9GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.213e-115414Zm.4.1.S1_atCD434423ferredoxin3-2e+0At1g10960ATFD1 (FERREDOXIN 1)C.G.S.X.
0.213e-115414Zm.4.1.S1_a_atCD434423ferredoxin3-2e+0At1g10960ATFD1 (FERREDOXIN 1)C.G.S.X.
0.011e+034Zm.6454.1.A1_atAY106137.1PP1/PP2A phosphatases pleiotropic regulator PRL1-9e-29At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)C.G.S.X.
0.011e+034Zm.14473.1.A1_atAI665307--1e-10At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)C.G.S.X.
0.011e+034Zm.14473.1.A1_a_atAI665307--1e-10At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)C.G.S.X.
0.021e+034Zm.12478.1.A1_atCF043347--7e-2At5g40630ubiquitin family proteinC.G.S.X.
0.014e+032Zm.7707.1.S1_a_atCK985938Hypothetical protein LOC100193555-1e-2At4g37210tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.024e+032Zm.7565.1.A1_atBM078965DNA-directed RNA polymerase II 8.2 kDa polypeptide /// DNA-directed RNA polymerase II 8.2 kDa polypeptide /// DNA-directed RNA polymerase II 8.2 kDa polypeptide-3e-7At1g61700DNA-directed RNA polymerase II, putative (RPB10)C.G.S.X.
0.014e+032Zm.7018.1.S1_atAY103620.1DNA-directed RNA polymerase II 8.2 kDa polypeptide-9e-12At1g61700DNA-directed RNA polymerase II, putative (RPB10)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-344Arabidopsis thalianaAt5g11860831059NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:chromosome, centromeric region, chromosome, nucleus;MOFPBV---C.G.S.X.
0.055e-550Glycine maxGmaAffx.73019.1.S1_atBU545254--4e-27At5g11860NLI interacting factor (NIF) family proteinC.G.S.X.
0.281e-71270Hordeum vulgareContig6244_atContig6244--1e-2At5g11860NLI interacting factor (NIF) family proteinC.G.S.X.
0.318e-162571Oryza sativaOsAffx.28390.1.S1_at---0C.G.S.X.
0.198e-756Populus trichocarpaPtpAffx.11920.1.A1_atCV246740hypothetical protein-4e-38At5g11860NLI interacting factor (NIF) family proteinC.G.S.X.
0.307e-50198Triticum aestivumTa.20533.1.S1_x_atCA612961--4e-2At5g46410NLI interacting factor (NIF) family proteinC.G.S.X.
0.037e-134Vitis vinifera1619886_atCF414305--5e+0At5g58590RANBP1 (RAN BINDING PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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