Gene omics information

Query gene ID	Zm.3964.1.A1_a_at
Gene name	ferric-chelate reductase (NADH)2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	81.1	Zm.3964.1.A1_a_at	AF205603.1	ferric-chelate reductase (NADH)2	-	1e-17	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	S.X.	H.G.	Please select
0.75	90.8	ZmAffx.533.1.S1_at	AI711769	-	-	8e-1	At5g11790	Ndr family protein	S.X.	H.G.	Please select
0.61	79.5	Zm.13456.2.A1_at	AY111230.1	Hypothetical protein LOC100194201	-	5e+0	At3g50520	phosphoglycerate/bisphosphoglycerate mutase family protein	S.X.	H.G.	Please select
0.57	75.1	ZmAffx.1198.1.A1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	S.X.	H.G.	Please select
0.57	75.1	Zm.10593.1.A1_at	BM380000	hypothetical protein LOC100194168	-	1e+0	At3g55350	unknown protein	S.X.	H.G.	Please select
0.56	74.4	ZmAffx.962.1.A1_at	AI833777	hypothetical protein LOC100275523	-	3e-22	At1g64680	unknown protein	S.X.	H.G.	Please select
0.33	36.0	Zm.18012.1.A1_at	CK827313	-	-	2e-3	At5g48950	thioesterase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.5	98.7	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
9.4	98.3	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
9.2	98.2	GSM206289	Upper pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.0	98.2	GSM206294	Lower pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.9	98.2	GSM206295	Lower pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.6	98.1	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.5	98.1	GSM206290	Upper pulvinus 15 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.3	97.4	GSM206293	Right pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.1	97.4	GSM206315	Upper pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.5	97.1	GSM206287	Left pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	1e-154	545	Zm.428.1.S1_at	AF077372.1	hypothetical protein LOC100191335	-	8e-16	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.8464.1.S1_at	AY107894.1	hypothetical protein LOC100191430	-	1e-8	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.811.1.A1_at	CA405132	cathepsin B-like cysteine proteinase 3	-	2e-23	At1g02305	cathepsin B-like cysteine protease, putative	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.14407.2.S1_at	AW424519	hypothetical protein LOC100272648	-	3e-140	At1g56070	LOS1	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.7823.1.S1_at	BM078187	-	-	3e-9	At1g09130	ATP-dependent Clp protease proteolytic subunit, putative	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.5083.2.A1_a_at	AY109962.1	dnaJ protein	-	2e-15	At3g44110	ATJ3	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.5083.2.A1_x_at	AY109962.1	dnaJ protein	-	2e-15	At3g44110	ATJ3	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.5083.3.A1_at	CF635089	dnaJ protein	-	2e-26	At3g44110	ATJ3	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.5083.2.S1_at	AY109962.1	-	-	1e-22	At5g22060	ATJ2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	1e-17	91	Arabidopsis thaliana	At5g17770	831645	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	9e-29	129	Glycine max	GmaAffx.19546.1.S1_at	BE583628	-	-	6e-63	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.54	0	732	Hordeum vulgare	Contig7709_at	Contig7709	-	-	9e-25	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.52	1e-161	571	Oryza sativa	Os05g0488900	AK071883.1	-	Cytochrome b5 reductase	5e-20	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.32	7e-11	69	Populus trichocarpa	Ptp.2560.1.S1_s_at	CV270621	hypothetical protein	-	1e-65	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.49	3e-145	515	Triticum aestivum	Ta.6627.1.S1_at	AF542186.1	-	-	2e-9	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.23	3e-19	95	Vitis vinifera	1621689_at	CF212507	hypothetical protein LOC100263819	-	3e-70	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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