Gene omics information

Query gene ID Zm.3961.1.S1_at
Gene name hypothetical protein LOC100272531
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5469.8Zm.3961.1.S1_atCK370362hypothetical protein LOC100272531-3e-7At1g70290ATTPS8S.X.H.G.
0.7490.3Zm.14428.1.S1_atAY106109.1cyclin-L2-4e+0At4g27410RD26 (RESPONSIVE TO DESICCATION 26)S.X.H.G.
0.6785.8Zm.16513.6.A1_atAI834422hypothetical protein LOC100191561-0At5g09810ACT7 (ACTIN 7)S.X.H.G.
0.6785.8Zm.554.1.A1_atCF630610glutathione transferase28-1e-1At1g17170ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24)S.X.H.G.
0.6481.7Zm.10174.1.S1_atAY111125.1--4e+0At2g47370-S.X.H.G.
0.6381.1Zm.534.1.A1_x_atAF276086.1protein kinase AKINbetagamma-2-3e-10At1g09020SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4)S.X.H.G.
0.6381.1Zm.6874.2.S1_a_atCF637577hypothetical protein LOC100193230-3e-3At2g45430DNA-binding protein-relatedS.X.H.G.
0.6381.1Zm.18270.1.A1_atCA399376Hypothetical protein LOC100194036-3e-6At4g37200HCF164S.X.H.G.
0.5065.7Zm.11624.1.A1_atCF637935thioredoxin H-type-3e-1At3g51030ATTRX1S.X.H.G.
0.4759.9Zm.14125.1.A1_atCO533246hypothetical protein LOC100273725-3e-4At3g51280male sterility MS5, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.198.4GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
8.398.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.597.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.997.7GSM206302Upper pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
6.897.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.197.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.597.1GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.396.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.458e-120430Zm.10067.1.A1_atBM349883--7e-1At2g18700ATTPS11C.G.S.X.
0.025e-756Zm.4623.1.A1_atAY104590.1Hypothetical protein LOC100217143-1e-3At1g23870ATTPS9C.G.S.X.
0.025e-756Zm.4623.1.S1_x_atAI372203Hypothetical protein LOC100217143-6e-2At1g68020ATTPS6C.G.S.X.
0.025e-756Zm.4623.1.S1_atAI372203Hypothetical protein LOC100217143-6e-2At1g68020ATTPS6C.G.S.X.
0.051e-448Zm.6106.1.A1_atAI670203--8e-1At5g37370ATSRL1C.G.S.X.
0.051e-448Zm.6106.1.S1_atAI670203--8e-1At5g37370ATSRL1C.G.S.X.
0.027e-342Zm.4623.2.S1_atAI737385Hypothetical protein LOC100217143-2e+0At1g79850RPS17 (RIBOSOMAL PROTEIN S17)C.G.S.X.
0.013e-240Zm.10044.1.A1_atBM340080Hypothetical protein LOC100191619-4e-11At5g37710lipase class 3 family protein / calmodulin-binding heat-shock protein, putativeC.G.S.X.
0.014e-136Zm.12022.1.A1_atBM382727--8e-1At4g04620ATG8B (autophagy 8b)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.143e-757Arabidopsis thalianaAt1g70290843365ATTPS8Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.---C.G.S.X.
0.092e-552Glycine maxGmaAffx.12926.1.A1_atBQ298426--1e-38At1g68020ATTPS6C.G.S.X.
0.360821Hordeum vulgareContig4657_atContig4657--3e-5At1g23870ATTPS9C.G.S.X.
0.370908Oryza sativaOs01g0749400AK067731.1-Glycosyl transferase, family 20 domain containingprotein2e-12At1g06410ATTPS7C.G.S.X.
0.121e-759Populus trichocarpaPtpAffx.210555.1.S1_atpmrna20709hypothetical protein-4e-16At1g23870ATTPS9C.G.S.X.
0.420730Triticum aestivumTa.30416.1.S1_atCK205280--3e-4At1g23870ATTPS9C.G.S.X.
0.091e-963Vitis vinifera1618726_atCB973545hypothetical protein LOC100265140-2e-27At1g06410ATTPS7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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