CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.394.1.S1_at

Gene name hypothetical protein LOC100193093

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.394.1.S1_at U95180.1 hypothetical protein LOC100193093 - 2e-1 At1g23340 unknown protein S.X. H.G.
0.67 85.8 Zm.3940.1.S1_at AY280630.1 single myb histone 5 - 3e-3 At1g49950 DNA-binding protein, putative S.X. H.G.
0.50 65.7 Zm.3939.1.A1_at AY111051.1 hypothetical protein LOC100273567 - 1e+0 At3g44280 unknown protein S.X. H.G.
0.31 31.6 Zm.3929.1.S1_at CO534253 hypothetical protein LOC100274493 - 7e-1 At1g78680 ATGGH2 (gamma-glutamyl hydrolase 2) S.X. H.G.
0.26 22.7 Zm.3936.1.S1_at AY112116.1 hypothetical protein LOC100275702 - 1e+0 At3g19900 unknown protein S.X. H.G.
0.16 9.4 Zm.3751.1.A1_at AW330700 serine esterase family protein - 2e+0 At4g05230 ubiquitin family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
26.8 99.7 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
19.1 99.2 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
17.3 99.1 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.5 99.0 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.1 99.0 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.6 98.9 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.1 98.8 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.8 98.8 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.4 98.8 GSM205427 Mo17xB73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.1 98.7 GSM205420 Mo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-6 52 Zm.1361.1.A1_at BM073484 hypothetical protein AY105746 - 2e-1 At5g62750 unknown protein C.G. S.X.
0.02 9e-5 48 Zm.8268.1.S1_at CK826607 thioredoxin M-type - 1e-1 At5g39950 ATTRX2 (THIOREDOXIN 2) C.G. S.X.
0.02 9e-5 48 Zm.17215.1.A1_at CO523350 RING zinc finger protein-like - 2e+0 At5g51440 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) C.G. S.X.
0.02 4e-4 46 Zm.9811.1.A1_at BM351496 - - 1e+0 At3g50250 unknown protein C.G. S.X.
0.03 4e-4 46 Zm.1194.1.S1_at CA403262 fasciclin-like arabinogalactan protein 10 - 2e-1 At5g52930 unknown protein C.G. S.X.
0.01 1e-3 44 Zm.5111.1.A1_at AW506740 hypothetical protein LOC100193449 - 4e-36 At4g27690 VPS26B (VACUOLAR PROTEIN SORTING 26B) C.G. S.X.
0.02 6e-3 42 Zm.6015.1.A1_at AI666198 - - 1e+0 At5g24570 unknown protein C.G. S.X.
0.02 6e-3 42 Zm.5464.1.A1_at AI622048 hypothetical protein LOC100272690 - 2e+0 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.01 6e-3 42 Zm.17628.1.S1_at CN845468 - - 6e-17 At2g34560 katanin, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-1 38 Arabidopsis thaliana At1g23340 838943 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFB - - - C.G. S.X.
0.03 3e-4 48 Glycine max PsAffx.CL1661Contig1_at PsAffx.CL1661Contig1 - - 4e-1 At1g77200 AP2 domain-containing transcription factor TINY, putative C.G. S.X.
0.02 2e-3 44 Hordeum vulgare Contig7819_at Contig7819 - - 1e-2 At5g02502 unknown protein C.G. S.X.
0.11 2e-12 75 Oryza sativa Os06g0285100 9634.m01760 - - 8e-2 At5g38980 unknown protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.220758.1.S1_at pmrna37180 hypothetical protein - 3e+0 At4g24026 unknown protein C.G. S.X.
0.41 0 724 Triticum aestivum TaAffx.113770.1.S1_at CA605441 - - 4e+0 At5g60670 60S ribosomal protein L12 (RPL12C) C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1607683_at CF207162 hypothetical protein LOC100266122 - 2e-5 At1g47710 serpin, putative / serine protease inhibitor, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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