Gene omics information

Query gene ID Zm.3903.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.8Zm.3903.1.S1_atAW438311--1e+0At5g02110CYCD7S.X.H.G.
0.5571.6Zm.12992.1.A1_atCA402979--2e+0At3g17365catalytic/ methyltransferaseS.X.H.G.
0.5571.6Zm.5976.2.S1_atBG265782--3e+0At5g4008060S ribosomal protein-relatedS.X.H.G.
0.4352.8Zm.1881.1.S1_atCF011561--5e-1At3g17590BSH (BUSHY GROWTH)S.X.H.G.
0.3844.2Zm.19208.1.A1_atCO525556--1e+0At1g04930hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.2724.6Zm.5194.1.A1_atBM269267--1e-3At2g46070MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.299.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.799.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.699.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.699.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.999.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.999.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.999.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.999.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.998.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-134Zm.3559.1.S1_atAY232822.1global transcription factor group E-2e-2At5g14270ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal Domain protein 9)C.G.S.X.
0.025e-134Zm.12731.1.S1_atCB381289hypothetical protein LOC100273853-4e-1At1g77030ATP binding / ATP-dependent helicase/ RNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid bindingC.G.S.X.
0.012e+032Zm.630.1.A1_atAF127022.1RNA polymerase2-1e-7At2g24120SCA3 (SCABRA 3)C.G.S.X.
0.038e+030Zm.9570.2.A1_x_atBM078097--5e+0At3g22070proline-rich family proteinC.G.S.X.
0.018e+030Zm.803.1.A1_atCF625813hypothetical protein LOC100274731-6e-1At5g25210unknown proteinC.G.S.X.
0.028e+030Zm.7258.1.S1_atCD981187hypothetical protein LOC100194035 /// hypothetical protein LOC100276802-5e-1At3g10620ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26)C.G.S.X.
0.018e+030Zm.6113.2.S1_atCD437021hypothetical protein LOC100276316-7e-1At4g22745MBD1C.G.S.X.
0.028e+030Zm.4694.1.A1_atCF630383mRNA 3-UTR binding protein-8e-3At3g14100oligouridylate-binding protein, putativeC.G.S.X.
0.038e+030Zm.3330.1.A1_atAW331197--1e+0At2g29390SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt5g02110831830CYCD7F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:nucleus;MPFO---C.G.S.X.
0.042e+034Glycine maxHgAffx.4080.1.A1_atCK348610--8e-1At1g70190ribosomal protein L12 family proteinC.G.S.X.
0.041e-136Hordeum vulgareEBed02_SQ002_H23_s_atEBed02_SQ002_H23--8e+0At4g26980unknown proteinC.G.S.X.
0.046e-136Oryza sativaOsAffx.11811.1.S1_at---0C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.222002.1.S1_atpmrna39187hypothetical protein-5e+0At4g39550kelch repeat-containing F-box family proteinC.G.S.X.
0.035e+032Triticum aestivumTaAffx.59648.1.S1_atCA597555--4e+0At3g15534unknown proteinC.G.S.X.
0.035e+030Vitis vinifera1617751_s_atCA813831hypothetical protein LOC100243312-8e-1At2g22980serine-type carboxypeptidaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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