Gene omics information

Query gene ID Zm.3892.3.A1_at
Gene name elongation factor 1 alpha
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6381.1Zm.3892.3.A1_atAF136829.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.3336.0Zm.12134.3.A1_a_atAI737095waxy1-2e+0At4g08691unknown proteinS.X.H.G.
0.2928.1Zm.11832.1.S1_atBM381116hypothetical protein LOC100277564-1e-7At1g57540unknown proteinS.X.H.G.
0.2928.1Zm.12573.2.A1_atAY109025.1hypothetical protein LOC100192765-9e+0At5g15600SP1L4 (SPIRAL1-LIKE4)S.X.H.G.
0.2724.6Zm.4271.5.A1_x_atAI881217hypothetical protein LOC100191665-2e+1At3g55470C2 domain-containing proteinS.X.H.G.
0.2419.8Zm.4872.1.A1_atAI666118--8e-8At5g21150PAZ domain-containing protein / piwi domain-containing proteinS.X.H.G.
0.2216.9Zm.8636.1.A1_atBM075018--2e+1At5g55507hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.1811.6Zm.13543.1.A1_atAY108273.1--2e-22At1g63160replication factor C 40 kDa, putativeS.X.H.G.
0.1710.6Zm.17643.1.S1_atCK368600--2e-1At5g54850unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
77.8100.0GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
35.399.9GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.499.8GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.899.5GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.499.3GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.298.5GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.396.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.396.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8002165Zm.3892.8.S1_atCA404367Elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.8002165Zm.3892.8.S1_a_atCA404367Elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.8002165Zm.3892.8.S1_x_atCA404367Elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.5902153Zm.3892.6.A1_x_atCD441708elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7602141Zm.3892.2.A1_a_atAF136824.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7602141Zm.3892.2.A1_x_atAF136824.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7101834Zm.3157.1.A1_atAF136826.1Elongation factor 1 alpha-0At1g07930elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7101582Zm.14419.1.A1_s_atU76259.1elongation factor 1-alpha-0At1g07940elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7301522Zm.3157.3.A1_atCK347593elongation factor 1-alpha-0At1g07930elongation factor 1-alpha / EF-1-alphaC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7801126Arabidopsis thalianaAt1g07920837307elongation factor 1-alpha / EF-1-alphaF:calmodulin binding, translation elongation factor activity;P:response to cadmium ion;C:mitochondrion, nucleolus, plasma membrane, chloroplast, membrane;BMOFPAV---C.G.S.X.
0.6901071Glycine maxGma.17616.1.S1_atAW568275--0At5g60390elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7601495Hordeum vulgareContig397_x_atContig397--0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.7101304Oryza sativaOs03g0177400AK103738.1-EF-1 alpha0At1g07920elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.590991Populus trichocarpaPtpAffx.291.3.S1_atCV238001hypothetical protein-0At1g07940elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.6901187Triticum aestivumTa.659.2.S1_x_atCN012989Translation elongation factor 1 alpha-subunit-0At5g60390elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.6601211Vitis vinifera1618385_atCF518525hypothetical protein LOC100246711-0At1g07940elongation factor 1-alpha / EF-1-alphaC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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