Gene omics information

Query gene ID Zm.3876.1.S1_at
Gene name hypothetical protein LOC100278092
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.3876.1.S1_atAY111960.1hypothetical protein LOC100278092-5e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)S.X.H.G.
0.6785.8Zm.13055.2.S1_atCA403909nuclear transcription factor Y subunit B-3-6e-19At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)S.X.H.G.
0.6179.5Zm.13136.1.A1_atCA404810hypothetical protein LOC100191921-4e+0At4g32900aminoacyl-tRNA hydrolaseS.X.H.G.
0.5065.7Zm.4733.1.A1_atCD441088hypothetical protein LOC100193930-2e-14At1g76900AtTLP1 (TUBBY LIKE PROTEIN 1)S.X.H.G.
0.4455.7ZmAffx.818.1.S1_atAI770442plant-specific domain TIGR01568 family protein-3e+0At5g05380PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3)S.X.H.G.
0.2724.6Zm.17833.1.S1_atCK394754hypothetical protein LOC100277612-2e+0At3g13740URF 4-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.499.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.099.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.399.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.699.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.499.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.099.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.699.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.899.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.499.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.492.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.225e-2097Zm.13283.1.S1_atCA826693--4e+0At1g04778unknown proteinC.G.S.X.
0.021e-136Zm.960.1.S1_atBU093044hypothetical protein LOC100274333-1e-4At2g22830SQE2 (squalene epoxidase 2)C.G.S.X.
0.021e-136Zm.8743.1.A1_atBM347268blue copper protein-1e-1At1g72230plastocyanin-like domain-containing proteinC.G.S.X.
0.026e-134Zm.13751.1.S1_atAY105922.1--9e+0At3g01700AGP11C.G.S.X.
0.016e-134Zm.13797.2.A1_atAY105820.1hypothetical protein LOC100279789-8e-4At3g20770EIN3 (ETHYLENE-INSENSITIVE3)C.G.S.X.
0.016e-134Zm.13797.2.S1_atAY105820.1--3e-6At1g73730EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)C.G.S.X.
0.026e-134Zm.11797.1.A1_atBM380828hypothetical protein LOC100277496-6e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)C.G.S.X.
0.022e+032Zm.4044.1.A1_atAY109936.1hypothetical protein LOC100273897 /// hypothetical protein LOC100274738-5e+0At5g13780GCN5-related N-acetyltransferase, putativeC.G.S.X.
0.022e+032Zm.4044.1.A1_a_atAY109936.1hypothetical protein LOC100273897 /// hypothetical protein LOC100274738-5e+0At5g13780GCN5-related N-acetyltransferase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt4g17030827411ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)EXPANSIN-RELATED. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)---C.G.S.X.
0.032e+034Glycine maxGmaAffx.23551.1.S1_atBE659564--3e+0At5g26070hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.062e-136Hordeum vulgareContig18117_atContig18117--3e+0At3g12930-C.G.S.X.
0.032e-757Oryza sativaOs09g0422000AK101900.1-Transferase family protein1e-2At3g58630transcription factorC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.147443.1.A1_atCV237283--2e+1At5g03995unknown proteinC.G.S.X.
0.094e-1685Triticum aestivumTa.9498.3.S1_x_atAL820015--1e+0At5g35610paired amphipathic helix repeat-containing proteinC.G.S.X.
0.043e-238Vitis vinifera1620734_atCD799694hypothetical protein LOC100246175-4e+0At4g03827unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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