Gene omics information

Query gene ID Zm.386.1.S1_at
Gene name tassel seed2
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8495.8Zm.386.1.S1_atL20621.1tassel seed2-4e-2At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)S.X.H.G.
0.6481.7ZmAffx.830.1.S1_atAI770534--6e+0At5g40930TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)S.X.H.G.
0.6381.1ZmAffx.1278.1.S1_s_at11990232-66--1e+0At3g22880DMC1 (DISRUPTION OF MEIOTIC CONTROL 1)S.X.H.G.
0.6381.1ZmAffx.902.1.S1_atAI770904hypothetical protein LOC100191467-3e+0At4g16640matrix metalloproteinase, putativeS.X.H.G.
0.5875.1Zm.3851.3.A1_a_atCA399586--5e+0At1g20340DRT112S.X.H.G.
0.4861.3Zm.8772.1.A1_atCF018678hypothetical protein LOC100192757-2e-38At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)S.X.H.G.
0.4658.4ZmAffx.147.1.S1_atAI667831Hypothetical protein LOC100192026-3e+0At2g20260PSAE-2 (photosystem I subunit E-2)S.X.H.G.
0.4352.8Zm.18134.1.A1_atCN844971--2e-1At2g18050HIS1-3 (HISTONE H1-3)S.X.H.G.
0.4352.8Zm.12546.1.S1_a_atAY104987.1--2e+0At3g43440JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.698.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.598.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.398.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.397.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.297.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.197.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.497.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.097.3GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-963Zm.3454.1.S1_atAW282335sex determination protein tasselseed-2-3e+0At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.011e-344Zm.237.1.S1_atAJ011616.1SBP-domain protein3-2e-8At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)C.G.S.X.
0.024e-342Zm.8727.1.A1_atBM350221hypothetical protein LOC100273818-1e-1At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)C.G.S.X.
0.024e-342Zm.4474.2.S1_a_atAY108450.1hypothetical protein LOC100279979 /// protein phosphatase 2C-3e+0At5g46720-C.G.S.X.
0.024e-342Zm.4474.2.A1_atAY108450.1--3e+0At5g46720-C.G.S.X.
0.024e-342Zm.3780.2.S1_atCF011300--9e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.022e-240Zm.758.1.S1_atCK827705dehydrogenase/reductase SDR family member 2-4e-5At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)C.G.S.X.
0.027e-238Zm.3154.1.A1_atBM333548GRF-interacting factor 2-like-1e-1At1g01160SSXT protein-related / transcription co-activator-relatedC.G.S.X.
0.037e-238Zm.13542.1.S1_atAY108280.1Transcription factor MYB31-4e-24At4g38620MYB4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-240Arabidopsis thalianaAt3g13850820598LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)F:unknown;P:biological_process unknown;C:chloroplast;PF---C.G.S.X.
0.021e-242Glycine maxGmaAffx.48821.1.S1_atAW761364--2e-2At5g17510unknown proteinC.G.S.X.
0.037e-238Hordeum vulgareContig12544_s_atContig12544--2e+1At5g03100F-box family proteinC.G.S.X.
0.577e-141502Oryza sativaOs03g0299200AK100767.1-Glucose/ribitol dehydrogenase family protein1e-1At2g02180TOM3C.G.S.X.
0.023e-344Populus trichocarpaPtpAffx.144078.1.S1_atCK107271hypothetical protein-2e-21At4g37130hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.101e-552Triticum aestivumTaAffx.30570.1.S1_atCA624001--4e+0At5g04830unknown proteinC.G.S.X.
0.021e-240Vitis vinifera1620952_atBQ799161--3e-1At3g03800SYP131 (SYNTAXIN OF PLANTS 131)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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