CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3845.1.A1_at

Gene name hypothetical protein LOC100274222

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.46 58.4 Zm.3845.1.A1_at AI711969 hypothetical protein LOC100274222 - 2e-7 At5g38470 DNA repair protein RAD23, putative S.X. H.G.
0.61 79.5 Zm.18243.1.A1_at CN845008 - - 3e-4 At1g23170 unknown protein S.X. H.G.
0.50 65.7 Zm.2384.1.S1_at AY104473.1 hypothetical protein LOC100273133 - 3e-2 At3g18380 sequence-specific DNA binding / transcription factor S.X. H.G.
0.40 48.5 Zm.4247.1.A1_at CF033638 - - 5e+0 At5g07310 AP2 domain-containing transcription factor, putative S.X. H.G.
0.40 48.5 Zm.5024.1.A1_at AI600448 isoamyl acetate-hydrolyzing esterase - 4e+0 At3g27210 unknown protein S.X. H.G.
0.38 44.2 Zm.5435.1.A1_at CO519825 mTERF-like protein - 1e+0 At3g60870 DNA-binding protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 96.7 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.9 96.7 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.5 96.3 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.4 96.2 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.3 96.1 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.9 95.7 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.9 95.7 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.3 94.7 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.2 94.5 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.73 0 1637 Zm.980.1.S1_at AY108395.1 DNA repair protein RAD23 - 2e-7 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.07 1e-7 57 Zm.4704.1.A1_at AI737319 DNA repair protein RAD23 - 5e-8 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.03 9e-2 38 Zm.16817.1.S1_at BM350354 Hypothetical protein LOC100191313 - 4e-3 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.02 4e-1 36 Zm.1979.1.S1_at AI948181 DNA repair protein RAD23-1 - 6e-11 At1g79650 RAD23 C.G. S.X.
0.01 4e-1 36 Zm.17518.1.S1_at CN844144 VIP1 protein - 6e-1 At2g01340 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.7976.1.S1_at BM080696 hypothetical protein LOC100217261 - 2e-46 At5g37680 ATARLA1A (ADP-ribosylation factor-like A1A) C.G. S.X.
0.01 6e+0 32 Zm.8470.1.S1_at AF493561.1 sucrose-phosphatase - 4e+0 At5g17220 ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12) C.G. S.X.
0.01 6e+0 32 Zm.6439.2.A1_at AI881500 eucaryotic initiation factor7 - 7e-14 At5g35620 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) C.G. S.X.
0.01 6e+0 32 Zm.6055.2.A1_at CA404791 - - 6e-15 At5g26710 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-7 57 Arabidopsis thaliana At5g38470 833835 DNA repair protein RAD23, putative F:damaged DNA binding;P:response to cold, nucleotide-excision repair;C:nucleus;MPOFBVA - - - C.G. S.X.
0.08 3e-7 57 Glycine max Gma.14281.1.S1_at BI968274 - - 2e-19 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.47 7e-74 278 Hordeum vulgare Contig3614_at Contig3614 - - 5e-2 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.48 3e-82 307 Oryza sativa Os06g0264300 AK061556.1 - UV excision repair protein Rad23 family protein 1e-12 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) C.G. S.X.
0.08 1e-6 56 Populus trichocarpa PtpAffx.23095.1.S1_at CX177404 hypothetical protein - 1e-3 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) C.G. S.X.
0.48 0 1049 Triticum aestivum TaAffx.113265.1.S1_at CA616833 - - 3e-4 At5g38470 DNA repair protein RAD23, putative C.G. S.X.
0.08 2e-11 69 Vitis vinifera 1607998_at BQ793788 hypothetical protein LOC100245820 - 4e-24 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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