Gene omics information

Query gene ID	Zm.384.1.A1_at
Gene name	physical impedance induced protein2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	69.1	Zm.384.1.A1_at	AF001635.1	physical impedance induced protein2	-	6e+0	At5g03100	F-box family protein	S.X.	H.G.	Please select
0.91	99.0	ZmAffx.1020.1.A1_at	AI881536	-	-	3e-7	At1g75640	leucine-rich repeat family protein / protein kinase family protein	S.X.	H.G.	Please select
0.80	94.0	Zm.16532.2.A1_at	AW331554	60S ribosomal protein L18a	-	4e-69	At3g14600	60S ribosomal protein L18A (RPL18aC)	S.X.	H.G.	Please select
0.77	92.1	Zm.2806.1.A1_a_at	AW067337	-	-	6e-1	At2g41660	MIZ1 (mizu-kussei 1)	S.X.	H.G.	Please select
0.50	65.7	Zm.9791.1.S1_at	AY110405.1	hypothetical protein LOC100216896	-	1e-78	At3g52580	40S ribosomal protein S14 (RPS14C)	S.X.	H.G.	Please select
0.50	65.7	Zm.5194.1.A1_at	BM269267	-	-	1e-3	At2g46070	MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.0	99.9	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
24.4	99.6	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
18.9	99.2	GSM206297	Lower pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
12.9	98.7	GSM206291	Upper pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
12.7	98.7	GSM375795	Deep-sowing 10d treatment Control, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
9.9	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM375788	Deep-sowing 10d treatment Control, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
7.4	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-1	34	ZmAffx.775.1.A1_at	AI746211	S-ribonuclease binding protein SBP1	-	8e-1	At4g32480	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	ZmAffx.775.1.S1_at	AI746211	-	-	8e-1	At4g32480	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.7073.1.A1_at	CD989559	hypothetical protein LOC100194311	-	4e-42	At1g13060	PBE1	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.6118.1.A1_at	CK986014	hypothetical protein LOC100276070	-	6e+0	At5g38895	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.6118.1.A1_a_at	CK986014	hypothetical protein LOC100276070 /// hypothetical protein LOC100278913	-	6e+0	At5g38895	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.5994.1.A1_at	CF056325	ribonucleoprotein	-	2e-10	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.4224.1.A1_at	CF019878	COX VIIa-like protein	-	5e+0	At3g55680	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.2146.1.A1_at	AW287813	-	-	5e+0	At5g35475	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.2041.1.A1_at	CO517600	hypothetical protein LOC100191381	-	3e-3	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e+0	32	Arabidopsis thaliana	At5g03100	831808	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	2e-3	44	Glycine max	Gma.7526.1.A1_at	BU548355	-	-	3e-7	At4g35985	senescence/dehydration-associated protein-related	C.G.	S.X.	Please select
0.49	1e-67	256	Hordeum vulgare	Contig9737_s_at	Contig9737	-	-	8e-9	At3g51250	senescence/dehydration-associated protein-related	C.G.	S.X.	Please select
0.32	2e-51	204	Oryza sativa	Os06g0717100	AK071437.1	-	Senescence-associated family protein	9e-4	At3g51250	senescence/dehydration-associated protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.222355.1.S1_at	pmrna39704	hypothetical protein	-	2e-2	At4g17215	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.33	4e-29	129	Triticum aestivum	Ta.7829.1.S1_at	BQ160762	-	-	2e-13	At3g51250	senescence/dehydration-associated protein-related	C.G.	S.X.	Please select
0.03	8e+0	30	Vitis vinifera	1620878_at	CF202635.1	-	-	5e-10	At3g51250	senescence/dehydration-associated protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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