Gene omics information

Query gene ID	Zm.3832.1.S1_at
Gene name	actin-depolymerizing factor
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.88	96.7	Zm.3832.1.S1_at	AY112267.1	actin-depolymerizing factor	-	1e-13	At4g25590	ADF7 (actin depolymerizing factor 7)	S.X.	H.G.	Please select
0.67	85.8	Zm.10122.1.S1_at	BM380628	transmembrane emp24 domain-containing protein 10	-	2e-3	At1g57620	emp24/gp25L/p24 family protein	S.X.	H.G.	Please select
0.64	81.7	Zm.9017.1.A1_at	BM338660	Hypothetical protein LOC100193460	-	2e+0	At1g64290	F-box protein-related	S.X.	H.G.	Please select
0.57	75.1	Zm.6743.3.S1_at	AY104585.1	hypothetical protein LOC100216801	-	2e-10	At3g02420	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.5542.1.S1_at	CO518213	Hypothetical protein LOC100193112	-	7e-4	At3g15140	exonuclease family protein	S.X.	H.G.	Please select
0.55	71.6	Zm.18462.1.S1_at	CO517427	-	-	1e+0	At4g09550	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.3058.1.A1_at	BM338821	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform	-	6e-36	At3g27300	G6PD5 (glucose-6-phosphate dehydrogenase 5)	S.X.	H.G.	Please select
0.50	65.7	Zm.4613.1.A1_at	CK826972	-	-	5e-1	At1g73770	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
34.6	99.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.6	99.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.0	99.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.5	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.3	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.2	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7	99.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	7e-103	373	Zm.10502.1.S1_at	CO521816	actin-depolymerizing factor	-	3e-17	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.30	2e-53	208	Zm.67.1.S1_at	AY104025.1	Actin-depolymerizing factor	-	3e-5	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.31	4e-52	204	Zm.16036.1.S1_at	CF010440	actin depolymerizing factor	-	1e-7	At5g52360	ADF10 (ACTIN DEPOLYMERIZING FACTOR 10)	C.G.	S.X.	Please select
0.35	2e-41	169	Zm.15444.1.S1_at	CK347287	actin-depolymerizing factor	-	6e-25	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.24	8e-38	157	Zm.17512.1.S1_at	CF057479	hypothetical protein LOC100192897	-	2e-9	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.12	4e-27	121	Zm.1019.1.A1_at	AW288674	actin-depolymerizing factor 5	-	2e-19	At2g16700	ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)	C.G.	S.X.	Please select
0.02	3e-3	42	Zm.4492.1.A1_at	AY107087.1	-	-	5e-1	At1g50300	TAF15 (TBP-associated factor 15)	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.4514.1.A1_at	CO532138	hypothetical protein LOC100279217	-	1e+0	At2g23310	ATRER1C1	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.26.1.A1_at	M97550.1	sucrose phosphate synthase1	-	1e-19	At1g04920	ATSPS3F (sucrose phosphate synthase 3F)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.34	1e-13	77	Arabidopsis thaliana	At4g25590	828664	ADF7 (actin depolymerizing factor 7)	F:actin binding;P:biological_process unknown;C:intracellular;MPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	3e-3	44	Glycine max	Gma.4270.1.S1_at	CF920385	-	-	2e-19	At3g46010	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)	C.G.	S.X.	Please select
0.24	3e-10	65	Hordeum vulgare	Contig7092_s_at	Contig7092	-	-	2e-2	At4g34970	ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)	C.G.	S.X.	Please select
0.47	1e-175	617	Oryza sativa	Os04g0555700	AK069329.1	-	Actin-depolymerizing factor (ADF)	2e-18	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	7e-7	56	Populus trichocarpa	PtpAffx.42674.1.A1_a_at	CV245980	actin depolymerizing factor 4	-	3e-23	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	7e-145	513	Triticum aestivum	Ta.10427.1.S1_at	BJ253468	-	-	5e-22	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.09	1e-14	79	Vitis vinifera	1606442_at	CF511173	hypothetical protein LOC100246819	-	7e-59	At3g46010	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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