Gene omics information

Query gene ID Zm.38.1.S1_at
Gene name ser/thr protein phosphatase1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5674.4Zm.38.1.S1_atM60215.1ser/thr protein phosphatase1-1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)S.X.H.G.
0.8395.6Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeS.X.H.G.
0.7188.2Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinS.X.H.G.
0.6179.5Zm.15542.1.S1_atCD219383--2e-2At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)S.X.H.G.
0.5775.1Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinS.X.H.G.
0.3336.0Zm.6863.2.A1_atCF637783hypothetical protein LOC100193970-7e-67At1g48410AGO1 (ARGONAUTE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.696.4GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.696.4GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
3.695.2GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.094.0GSM206290Upper pulvinus 15 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
2.993.8GSM206331Lower pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
2.993.8GSM206294Lower pulvinus 2 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
2.993.8GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
2.993.8GSM206295Lower pulvinus 5 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.357e-166583Zm.6948.1.A1_atAW288752serine/threonine-protein phosphatase PP1-8e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)C.G.S.X.
0.228e-27121Zm.2365.1.A1_atAY105210.1hypothetical protein LOC100191199-3e-28At1g64040TOPP3C.G.S.X.
0.168e-27121Zm.2365.1.A1_a_atAY105210.1hypothetical protein LOC100191199 /// hypothetical protein LOC100216757-3e-28At1g64040TOPP3C.G.S.X.
0.175e-22105Zm.2365.2.S1_atAI739988hypothetical protein LOC100216757-1e-14At1g64040TOPP3C.G.S.X.
0.175e-22105Zm.2365.2.S1_x_atAI739988hypothetical protein LOC100216757-1e-14At1g64040TOPP3C.G.S.X.
0.205e-1995Zm.4824.2.S1_atAY109296.1--1e-30At2g39840TOPP4C.G.S.X.
0.073e-550Zm.6274.1.A1_atAI691216--9e-16At5g27840TOPP8C.G.S.X.
0.019e-238Zm.9014.1.S1_a_atCK347434PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2 /// PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2-7e-100At2g42500PP2A-4C.G.S.X.
0.019e-238Zm.9014.2.A1_atAI714470PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2-2e-68At2g42500PP2A-4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.261e-1275Arabidopsis thalianaAt2g29400817489TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)Type 1 protein phosphatase, expressed in roots, rosettes and flowers---C.G.S.X.
0.403e-23111Glycine maxGmaAffx.89525.1.S1_s_atCK606517--3e-26At2g39840TOPP4C.G.S.X.
0.520884Hordeum vulgareContig1227_atContig1227--4e-21At2g39840TOPP4C.G.S.X.
0.590751Oryza sativaOs02g0820000AF383877.1-Serine/threonine protein phosphatase PP1 isozyme 2(EC 3.1.3.16)3e-9At3g46820TOPP5C.G.S.X.
0.382e-24115Populus trichocarpaPtpAffx.211013.1.S1_atpmrna21640hypothetical protein-2e-40At5g59160TOPP2C.G.S.X.
0.473e-176619Triticum aestivumTa.14255.1.S1_atBJ285435--1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)C.G.S.X.
0.193e-756Vitis vinifera1621807_atCF568822--1e-27At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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