CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3799.1.A1_at

Gene name hypothetical protein LOC100192947

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.45 56.4 Zm.3799.1.A1_at CK367871 hypothetical protein LOC100192947 - 3e-1 At2g03310 unknown protein S.X. H.G.
0.82 94.6 Zm.17158.3.A1_at BM078932 - - 4e+0 At3g08920 rhodanese-like domain-containing protein S.X. H.G.
0.78 92.5 Zm.3864.1.A1_at AY106452.1 calmodulin2 - 8e-80 At3g56800 CAM3 (CALMODULIN 3) S.X. H.G.
0.72 88.6 Zm.2376.7.A1_at BM079913 - - 2e-2 At5g60370 unknown protein S.X. H.G.
0.71 88.2 Zm.7720.1.S1_at CK347322 - - 2e-10 At2g21630 transport protein, putative S.X. H.G.
0.70 87.0 Zm.15626.1.S1_at CA404507 - - 1e-8 At5g66510 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3) S.X. H.G.
0.67 85.8 Zm.14497.12.A1_at CA404826 hypothetical protein LOC100192792 - 6e-22 At1g07790 HTB1 S.X. H.G.
0.67 85.8 Zm.17771.1.S1_at CF623570 - - 5e+0 At5g27860 unknown protein S.X. H.G.
0.53 69.1 Zm.12573.1.A1_a_at BI233467 hypothetical protein LOC100192765 /// hypothetical protein LOC100276406 - 2e+0 At3g20450 - S.X. H.G.
0.44 55.7 Zm.5603.1.A1_at CF626554 hypothetical protein LOC100276587 - 6e+0 At5g56600 PRF3 (PROFILIN 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 96.7 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.0 96.7 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.7 96.5 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.6 96.4 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.5 96.3 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.5 96.3 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.2 96.0 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.1 95.9 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.1 95.9 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.6 95.2 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 34 Zm.4539.1.S1_at AY108790.1 protein kinase G11A - 2e-25 At2g44830 protein kinase, putative C.G. S.X.
0.03 6e-1 34 Zm.17287.1.A1_at CK144321 - - 5e+0 At5g54500 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) C.G. S.X.
0.02 2e+0 32 Zm.9719.1.A1_at BM332935 hypothetical protein LOC100273981 - 1e+0 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.03 2e+0 32 Zm.9236.1.A1_at BM339258 - - 8e-2 At3g01860 unknown protein C.G. S.X.
0.01 2e+0 32 Zm.448.1.S1_at AF126054.1 Rop3 small GTP binding protein - 6e-8 At5g62880 ARAC10 C.G. S.X.
0.01 2e+0 32 Zm.18479.1.A1_at CF047510 - - 2e-1 At3g44560 FAR8 (FATTY ACID REDUCTASE 8) C.G. S.X.
0.01 2e+0 32 Zm.12617.1.S1_at CD441264 - - 1e+0 At3g13920 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1) C.G. S.X.
0.01 2e+0 32 Zm.12617.1.A1_at BU050965 - - 1e+0 At3g13920 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1) C.G. S.X.
0.02 2e+0 32 Zm.10632.1.A1_at BQ538717 - - 6e-3 At2g45530 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At2g03310 814860 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max GmaAffx.73842.1.S1_at AW101957 WRKY20 protein - 3e+0 At5g02770 unknown protein C.G. S.X.
0.32 2e-56 218 Hordeum vulgare Contig10542_at Contig10542 - - 4e+0 At4g16800 enoyl-CoA hydratase, putative C.G. S.X.
0.33 1e-57 224 Oryza sativa Os01g0271700 CB965454 - Conserved hypothetical protein 4e+0 At5g40970 unknown protein C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.86770.1.S1_at CA821831 hypothetical protein - 7e-1 At4g05340 ATP binding C.G. S.X.
0.59 1e-145 515 Triticum aestivum Ta.17513.1.S1_at CA621416 - - 2e-1 At2g03310 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1611639_at CB976306 - - 4e+0 At4g05590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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