CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3767.2.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 55.7 Zm.3767.2.A1_at BM073671 - - 1e-7 At5g20890 chaperonin, putative S.X. H.G.
0.67 85.8 Zm.7611.2.A1_at BM268818 - - 2e-3 At1g49400 emb1129 (embryo defective 1129) S.X. H.G.
0.50 65.7 Zm.3486.2.A1_at AY111804.1 - - 3e-1 At5g52545 unknown protein S.X. H.G.
0.47 59.9 Zm.15852.2.A1_at AY108720.1 - - 1e-41 At5g03430 phosphoadenosine phosphosulfate (PAPS) reductase family protein S.X. H.G.
0.44 55.7 Zm.19300.1.S1_at CO522732 DNA repair protein RAD51 - 3e+0 At2g45280 ATRAD51C S.X. H.G.
0.44 55.7 Zm.6644.2.A1_at AY109212.1 - - 4e+0 At5g42050 - S.X. H.G.
0.36 41.3 Zm.2716.1.A1_at CD440659 - - 3e+0 At4g28700 AMT1 S.X. H.G.
0.36 41.3 Zm.13871.1.A1_at AF099434.1 R2R3MYB-domain protein - 2e-5 At1g08810 MYB60 (myb domain protein 60) S.X. H.G.
0.35 38.9 Zm.15678.1.A1_at CD440195 hypothetical protein LOC100192926 - 7e+0 At4g18280 glycine-rich cell wall protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.5 97.5 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.0 97.3 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.8 97.2 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.7 97.2 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.7 97.2 GSM205368 B73xMo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.6 97.1 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.5 97.1 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.5 97.1 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.5 97.1 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.4 97.0 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 0 666 Zm.6590.1.A1_at AY108493.1 Hypothetical protein LOC100191320 - 4e-114 At5g20890 chaperonin, putative C.G. S.X.
0.04 6e-4 44 Zm.12315.1.S1_at BM380411 hypothetical protein LOC100273048 - 2e-7 At1g01360 unknown protein C.G. S.X.
0.04 3e-3 42 Zm.15825.1.S1_at CA403397 glucan endo-1,3-beta-glucosidase A6 - 2e-2 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.04 3e-3 42 Zm.15825.1.S1_x_at CA403397 glucan endo-1,3-beta-glucosidase A6 - 2e-2 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.04 3e-3 42 Zm.12315.2.A1_at BM334630 hypothetical protein LOC100192034 - 5e-1 At3g11650 NHL2 C.G. S.X.
0.04 1e-2 40 Zm.2732.1.A1_at AW067014 hypothetical protein LOC100275163 - 1e+0 At1g67856 protein binding / zinc ion binding C.G. S.X.
0.03 4e-2 38 Zm.14237.1.S1_at AY109253.1 hypothetical protein LOC100276891 - 2e+0 At4g29970 F-box family protein C.G. S.X.
0.03 2e-1 36 Zm.5661.1.A1_at AY107527.1 - - 1e+0 At2g33585 unknown protein C.G. S.X.
0.06 2e-1 36 Zm.5348.1.A1_at AI619352 hypothetical protein LOC100216737 - 6e-2 At4g29970 F-box family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 1e-7 57 Arabidopsis thaliana At5g20890 832213 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:anchored to plasma membrane, cell wall;BOMFPA - - - C.G. S.X.
0.26 1e-20 101 Glycine max Gma.4039.1.S1_at BI969363 - - 3e-18 At5g20890 chaperonin, putative C.G. S.X.
0.34 9e-56 216 Hordeum vulgare Contig5265_at Contig5265 - - 9e-74 At5g20890 chaperonin, putative C.G. S.X.
0.38 1e-110 400 Oryza sativa Os03g0619400 CB653322 - Chaperonin Cpn60 family protein 1e-57 At5g20890 chaperonin, putative C.G. S.X.
0.23 6e-13 75 Populus trichocarpa Ptp.6712.1.S1_at CV235223 hypothetical protein - 0 At5g20890 chaperonin, putative C.G. S.X.
0.38 5e-62 238 Triticum aestivum Ta.24153.1.S1_at CK209522 - - 1e-4 At5g20890 chaperonin, putative C.G. S.X.
0.21 3e-17 87 Vitis vinifera 1613231_at CF210634 hypothetical protein LOC100257518 - 4e-88 At5g20890 chaperonin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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