CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.375.1.S1_at

Gene name trypsin inhibitor

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.375.1.S1_at AF057184.1 trypsin inhibitor - 1e-1 At5g02440 unknown protein S.X. H.G.
0.67 85.8 Zm.1918.1.S1_at AW520033 hypothetical protein LOC100216771 - 6e+0 At5g42900 unknown protein S.X. H.G.
0.57 75.1 Zm.1967.2.A1_at CF637323 pre-mRNA-splicing factor prp45 - 6e-26 At1g77180 chromatin protein family S.X. H.G.
0.27 24.6 Zm.11992.1.A1_at BM382475 - - 3e+0 At5g41614 unknown protein S.X. H.G.
0.25 21.3 Zm.18125.1.S1_at CN844337 - - 4e-1 At3g47380 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.22 16.9 Zm.10287.1.S1_at BM736731 - - 1e+0 At2g45250 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
29.9 99.8 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
26.6 99.7 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
24.5 99.6 GSM385708 Deep-sowing 10d treatment IAA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
20.8 99.4 GSM385707 Deep-sowing 10d treatment IAA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
19.0 99.2 GSM375795 Deep-sowing 10d treatment Control, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
18.6 99.2 GSM375791 Deep-sowing 10d treatment GA3, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
17.8 99.1 GSM375788 Deep-sowing 10d treatment Control, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
16.2 99.0 GSM375796 Deep-sowing 10d treatment GA3, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
9.1 98.2 GSM375797 Deep-sowing 10d treatment UCZ, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
8.8 98.1 GSM375794 Deep-sowing 10d treatment UCZ, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 4e-166 583 Zm.15307.1.A1_at CF014037 - - 2e-11 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) C.G. S.X.
0.56 3e-96 351 Zm.6656.1.A1_at AI374527 Bowman-Birk type bran trypsin inhibitor - 5e-1 At1g01840 unknown protein C.G. S.X.
0.07 6e-11 67 Zm.11877.1.A1_at BM381448 - - 9e-1 At4g39250 ATRL1 (ARABIDOPSIS RAD-LIKE 1) C.G. S.X.
0.03 5e-2 38 Zm.6887.1.A1_at AI065555 hypothetical protein LOC100194370 - 1e+0 At3g25940 transcription factor S-II (TFIIS) domain-containing protein C.G. S.X.
0.03 2e-1 36 Zm.9841.1.A1_at BM340753 - - 6e-3 At2g01340 unknown protein C.G. S.X.
0.02 2e-1 36 Zm.2926.1.A1_at CF630141 calmodulin-like protein 1 - 2e+0 At5g55750 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 2e-1 36 Zm.13120.1.A1_at CK347606 Hypothetical protein LOC100191270 - 4e-2 At2g01340 unknown protein C.G. S.X.
0.03 8e-1 34 ZmAffx.1192.1.A1_at BE025301 - - 6e+0 At3g53650 histone H2B, putative C.G. S.X.
0.03 8e-1 34 ZmAffx.1192.1.S1_at BE025301 hypothetical protein LOC100278640 - 6e+0 At3g53650 histone H2B, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Arabidopsis thaliana At5g02440 831872 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.42349.2.S1_at BG653753 - - 4e+0 At5g48280 unknown protein C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig22184_at Contig22184 - - 5e+0 At5g56070 unknown protein C.G. S.X.
0.06 1e-2 42 Oryza sativa Os01g0124200 AB098712.1 - Bowman Birk trypsin inhibitor 2e+0 At4g00310 EDA8 (EMBRYO SAC DEVELOPMENT ARREST 8) C.G. S.X.
0.03 6e-1 36 Populus trichocarpa PtpAffx.454.37.A1_a_at CV225454 hypothetical protein - 1e+0 At1g66200 ATGSR2 C.G. S.X.
0.05 8e-3 42 Triticum aestivum Ta.3144.2.S1_x_at CK161534 - - 2e+1 At5g25752 RBL11 (RHOMBOID-LIKE PROTEIN 11) C.G. S.X.
0.03 5e-1 34 Vitis vinifera 1621831_at CF373078 - - 5e+0 At5g49210 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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