Gene omics information

Query gene ID Zm.3707.1.A1_at
Gene name vacuolar cation/proton exchanger 2
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.0Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)S.X.H.G.
0.7792.1Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.6785.8Zm.6439.2.A1_atAI881500eucaryotic initiation factor7-7e-14At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)S.X.H.G.
0.6179.5Zm.737.2.A1_atAI746142--4e-6At5g60360AALP (Arabidopsis aleurain-like protease)S.X.H.G.
0.4658.4Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinS.X.H.G.
0.3641.3Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.499.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.099.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.899.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.599.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.099.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.099.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.699.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.098.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.097.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.079e-1373Zm.7306.1.S1_atAB044567.1Ca2+/H+ antiporter-7e-11At3g13320CAX2 (CATION EXCHANGER 2)C.G.S.X.
0.011e-240Zm.4887.1.S1_atAY108295.1hypothetical protein LOC100192109-6e-5At3g51860CAX3 (CATION EXCHANGER 3)C.G.S.X.
0.027e-134Zm.4656.1.A1_atCF635280IDP334 protein-4e-35At1g16890ubiquitin-conjugating enzyme, putativeC.G.S.X.
0.027e-134Zm.14826.1.A1_atAJ430637.1m23 protein-2e-16At4g18960AG (AGAMOUS)C.G.S.X.
0.027e-134Zm.14826.1.S1_atAJ430637.1m23 protein-2e-16At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.023e+032Zm.8525.1.A1_atBM074538pnFL-2-1e-1At3g22275unknown proteinC.G.S.X.
0.013e+032Zm.538.1.S1_atAF256229.1calcium exchanger1-1e-6At3g51860CAX3 (CATION EXCHANGER 3)C.G.S.X.
0.023e+032Zm.4405.1.A1_atBG841902vacuolar sorting protein 4b-5e+0At2g40790ATCXXS2 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1)C.G.S.X.
0.021e+130ZmAffx.278.1.A1_atAI670406--8e-1At1g73875endonuclease/exonuclease/phosphatase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-448Arabidopsis thalianaAt3g13320820532CAX2 (CATION EXCHANGER 2)low affinity calcium antiporter CAX2---C.G.S.X.
0.112e-448Glycine maxGma.16198.1.S1_atAW306344--5e-6At1g55720ATCAX6C.G.S.X.
0.061e-1273Hordeum vulgareContig9559_atContig9559--2e-5At3g13320CAX2 (CATION EXCHANGER 2)C.G.S.X.
0.088e-35149Oryza sativaOs03g0397400AK069928.1-Low affinity calcium transporter CAX2 (Fragment)2e-5At1g55720ATCAX6C.G.S.X.
0.084e-859Populus trichocarpaPtpAffx.209477.1.S1_atpmrna18794Ca2+ antiporter/cation exchanger-4e-11At3g13320CAX2 (CATION EXCHANGER 2)C.G.S.X.
0.137e-37155Triticum aestivumTa.4867.1.S1_atBQ905556--2e-7At1g55720ATCAX6C.G.S.X.
0.022e+032Vitis vinifera1607358_atCB976926--2e+1At5g42797LCR28 (Low-molecular-weight cysteine-rich 28)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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