Gene omics information

Query gene ID	Zm.3633.2.S1_x_at
Gene name	APx1 - Cytosolic Ascorbate Peroxidase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	79.5	Zm.3633.2.S1_x_at	CF634876	APx1 - Cytosolic Ascorbate Peroxidase	-	3e-28	At1g07890	APX1 (ascorbate peroxidase 1)	S.X.	H.G.	Please select
0.91	99.0	Zm.11605.1.A1_at	BM379262	-	-	4e+0	At4g11930	unknown protein	S.X.	H.G.	Please select
0.71	88.2	Zm.4385.1.S1_at	BQ487047	small nuclear ribonucleoprotein-associated protein B	-	3e-15	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.3699.5.A1_at	AY107222.1	-	-	3e-2	At5g09995	unknown protein	S.X.	H.G.	Please select
0.60	77.8	Zm.4132.1.A1_at	CO529833	hypothetical protein LOC100276765	-	4e-14	At1g16520	unknown protein	S.X.	H.G.	Please select
0.53	69.1	Zm.8233.1.A1_at	AI947630	-	-	1e-2	At4g31580	SRZ-22	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.3	91.7	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.3	91.7	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.1	90.8	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.1	90.8	GSM375794	Deep-sowing 10d treatment UCZ, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
2.1	90.8	GSM206313	Upper pulvinus 5 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206324	Upper pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206319	Lower pulvinus 5 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206334	Lower pulvinus 60 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
1.9	89.6	GSM206322	Lower pulvinus 60 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.59	0	1164	Zm.3633.7.S1_at	CF048475	APx1 - Cytosolic Ascorbate Peroxidase	-	4e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.50	0	906	Zm.3633.6.S1_at	CF005633	APx1 - Cytosolic Ascorbate Peroxidase	-	5e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.56	0	720	Zm.3633.3.S1_a_at	AW067076	APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase	-	6e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.56	0	720	Zm.3633.3.S1_x_at	AW067076	ascorbate peroxidase	-	6e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.43	0	648	Zm.3633.8.A1_at	AI881249	-	-	7e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.43	0	648	Zm.3633.8.S1_x_at	AI881249	APx1 - Cytosolic Ascorbate Peroxidase	-	7e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.40	1e-89	329	Zm.76.1.A1_at	BG842749	ascorbate peroxidase2	-	3e-27	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.04	1e-6	54	Zm.6166.1.A1_a_at	CD996417	hypothetical protein LOC100193965	-	3e-18	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.1954.1.A1_at	AY104136.1	-	-	1e+0	At5g18748	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	3e-28	127	Arabidopsis thaliana	At1g07890	837304	APX1 (ascorbate peroxidase 1)	Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.26	3e-25	117	Glycine max	GmaAffx.89703.1.A1_at	CK606389	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	3e-24	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.51	0	696	Hordeum vulgare	Contig1728_at	Contig1728	-	-	1e-14	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.52	0	741	Oryza sativa	Os03g0285700	AY254495.1	-	Ascorbate peroxidase (EC 1.11.1.11) (Cytosolicascorbate peroxidase 1)	3e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	3e-44	180	Populus trichocarpa	PtpAffx.5471.1.A1_a_at	CV252337	hypothetical protein	-	3e-15	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.47	0	666	Triticum aestivum	Ta.23079.1.S1_a_at	BJ317746	-	-	2e-13	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.18	4e-24	111	Vitis vinifera	1606498_s_at	CF214775	ascorbate peroxidase	-	7e-22	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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