CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3569.1.A1_at

Gene name hypothetical protein LOC100280101

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.3569.1.A1_at CO518726 hypothetical protein LOC100280101 - 5e+0 At3g55600 - S.X. H.G.
0.73 89.9 Zm.3570.1.A1_at BG840178 - - 6e-1 At1g54260 histone H1/H5 family protein S.X. H.G.
0.71 88.2 Zm.3571.1.S1_at BG265645 Hypothetical protein LOC100193516 - 4e+0 At4g17030 ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) S.X. H.G.
0.67 85.8 Zm.853.1.A1_at AI395965 hypothetical protein LOC100276013 - 2e-12 At4g01150 unknown protein S.X. H.G.
0.57 75.1 Zm.6703.1.A1_at CA398710 hypothetical protein LOC100273224 - 1e+0 At2g01120 ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4) S.X. H.G.
0.25 21.3 Zm.3572.1.A1_at BG873875 harpin-induced protein - 2e+0 At2g14890 AGP9 (ARABINOGALACTAN PROTEIN 9) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.5 99.9 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
32.4 99.8 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
32.3 99.8 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
18.0 99.2 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
16.7 99.1 GSM253276 ZM_8d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
13.7 98.8 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
13.6 98.8 GSM320443 protocol: mRNA - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6 98.7 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
9.4 98.3 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
8.4 98.1 GSM253267 ZM_4d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 1e-60 232 Zm.9737.1.A1_at BM337359 - - 1e+0 At5g56770 unknown protein C.G. S.X.
0.04 2e-6 52 Zm.3656.1.A1_at AY106382.1 Wound responsive protein-like - 2e-1 At1g75380 wound-responsive protein-related C.G. S.X.
0.02 5e-1 34 Zm.3439.1.A1_at CF048515 hypothetical protein LOC100272944 - 3e-6 At1g60030 xanthine/uracil permease family protein C.G. S.X.
0.02 5e-1 34 Zm.222.1.S1_at AB024291.1 cytokinin response regulator2 - 4e-1 At1g10470 ARR4 (RESPONSE REGULATOR 4) C.G. S.X.
0.02 2e+0 32 Zm.4364.1.A1_at BM349138 hypothetical protein LOC100273301 - 7e+0 At4g14320 60S ribosomal protein L36a/L44 (RPL36aB) C.G. S.X.
0.02 2e+0 32 Zm.13566.1.S1_at CF636948 hypothetical protein LOC100278328 - 5e+0 At1g11608 - C.G. S.X.
0.01 8e+0 30 Zm.8750.1.A1_at BM336352 - - 2e-1 At1g72230 plastocyanin-like domain-containing protein C.G. S.X.
0.01 8e+0 30 Zm.7011.1.S1_s_at CA398268 hypothetical protein LOC100191203 - 3e-19 At4g21110 G10 family protein C.G. S.X.
0.01 8e+0 30 Zm.7011.1.S1_at CA398268 hypothetical protein LOC100191203 - 3e-19 At4g21110 G10 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 32 Arabidopsis thaliana At3g55600 824725 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFBO - - - C.G. S.X.
0.04 4e-1 36 Glycine max GmaAffx.3619.1.S1_at BQ785103 - - 5e-76 At1g75380 wound-responsive protein-related C.G. S.X.
0.23 3e-18 91 Hordeum vulgare Contig4701_at Contig4701 - - 2e-1 At1g19660 wound-responsive family protein C.G. S.X.
0.28 2e-34 147 Oryza sativa Os01g0702000 AK065414.1 - Conserved hypothetical protein 4e-5 At1g75380 wound-responsive protein-related C.G. S.X.
0.03 4e-1 36 Populus trichocarpa PtpAffx.63503.1.A1_at CV238586 - - 1e+1 At5g23950 C2 domain-containing protein C.G. S.X.
0.60 6e-163 573 Triticum aestivum Ta.26655.1.S1_at CD491484 - - 4e-1 Atmg00740 - C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1622314_at BQ797206 hypothetical LOC100267802 - 4e+0 At5g47620 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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