CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3332.1.A1_at

Gene name putative serine type endopeptidase inhibitor

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 Zm.3332.1.A1_at BM379802 putative serine type endopeptidase inhibitor - 4e+0 At3g11650 NHL2 S.X. H.G.
0.57 75.1 ZmAffx.765.1.A1_at AI746076 hypothetical protein LOC100279036 - 4e+0 At5g11660 unknown protein S.X. H.G.
0.55 71.6 Zm.2368.1.S1_at AY109497.1 plastidic phosphate translocator-like protein1 - 4e-21 At4g32390 phosphate translocator-related S.X. H.G.
0.54 69.8 Zm.6559.1.A1_at CF051688 - - 3e-14 At5g26830 threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) S.X. H.G.
0.44 55.7 Zm.4299.1.S1_at CF046651 hypothetical protein LOC100279924 - 5e-14 At3g21630 CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1) S.X. H.G.
0.40 48.5 Zm.6207.3.A1_x_at CA403318 60S ribosomal protein L15 - 3e-26 At4g17390 60S ribosomal protein L15 (RPL15B) S.X. H.G.
0.35 38.9 Zm.437.1.A1_a_at AF007580.1 translation initiation factor - 7e-162 At1g54270 EIF4A-2 S.X. H.G.
0.34 37.2 ZmAffx.228.1.A1_at AI670240 - - 5e-2 At5g59000 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.32 33.4 Zm.5267.1.A1_at BM340432 copine-1 - 1e-11 At3g01650 RGLG1 (RING domain Ligase1) S.X. H.G.
0.31 31.6 Zm.2910.1.S1_a_at CK145276 hypothetical protein LOC100217030 /// hypothetical protein LOC100277437 - 8e+0 At5g02920 ubiquitin-protein ligase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
91.4 100.0 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
26.4 99.7 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
22.8 99.5 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
19.6 99.3 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
14.4 98.9 GSM253271 ZM_4.5d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
10.6 98.4 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.3 97.8 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.0 97.7 GSM253266 ZM_4d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
5.1 96.8 GSM253249 ZM_12h_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM253272 ZM_4.5d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 36 Zm.1188.1.A1_at BE512438 - - 6e-1 At3g08680 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.02 1e-1 36 Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.01 2e+0 32 Zm.394.1.S1_at U95180.1 hypothetical protein LOC100193093 - 2e-1 At1g23340 unknown protein C.G. S.X.
0.02 2e+0 32 Zm.3094.1.S1_at CK986065 - - 7e-16 At1g03260 - C.G. S.X.
0.03 2e+0 32 Zm.2266.1.A1_s_at AW330883 - - 5e+0 At3g44940 unknown protein C.G. S.X.
0.03 2e+0 32 Zm.2266.1.A1_at AW330883 - - 5e+0 At3g44940 unknown protein C.G. S.X.
0.01 2e+0 32 Zm.14474.1.S1_a_at CD001875 hypothetical protein LOC100273044 - 1e-33 At2g34560 katanin, putative C.G. S.X.
0.01 2e+0 32 Zm.14474.1.A1_at AY104519.1 - - 1e-33 At2g34560 katanin, putative C.G. S.X.
0.01 6e+0 30 Zm.6866.1.S1_at CO526072 nucleic acid binding protein - 2e-1 At4g17720 RNA recognition motif (RRM)-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At3g11650 820337 NHL2 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.15372.1.S1_at BU926389 - - 3e+0 At4g16444 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBes01_SQ002_O07_at EBes01_SQ002_O07 - - 3e+0 At4g00880 auxin-responsive family protein C.G. S.X.
0.03 2e+0 34 Oryza sativa OsAffx.26405.1.S1_at - - - 0 C.G. S.X.
0.03 1e+0 34 Populus trichocarpa PtpAffx.64650.1.S1_at CK115553 - - 3e-1 At3g18160 peroxin-3 family protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.64716.1.S1_at BJ279767 - - 3e-13 At1g10620 protein kinase family protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1612219_at CA810907 - - 4e+0 At1g71000 heat shock protein binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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