Gene omics information

Query gene ID	Zm.3283.2.A1_a_at
Gene name	hypothetical protein LOC100192072
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.3283.2.A1_a_at	BM335982	hypothetical protein LOC100192072	-	2e+0	At3g46110	unknown protein	S.X.	H.G.	Please select
0.55	71.6	Zm.13931.1.A1_x_at	Z35302.1	-	-	8e-1	At1g09630	ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)	S.X.	H.G.	Please select
0.31	31.6	Zm.3930.1.S1_at	BQ538158	AMP-binding protein	-	8e-37	At3g05970	LACS6 (long-chain acyl-CoA synthetase 6)	S.X.	H.G.	Please select
0.27	24.6	Zm.9285.1.A1_at	BM339972	disease resistance response protein 206	-	6e+0	At5g46874	-	S.X.	H.G.	Please select
0.26	22.7	Zm.9900.1.A1_at	BM351046	-	-	2e-2	At5g28610	-	S.X.	H.G.	Please select
0.25	21.3	Zm.17512.1.S1_at	CF057479	hypothetical protein LOC100192897	-	2e-9	At4g25590	ADF7 (actin depolymerizing factor 7)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.1	96.8	GSM258533	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
4.6	96.4	GSM323170	Zm_SG200Dpep1_24hpi_I	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
4.6	96.4	GSM258531	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
4.5	96.3	GSM258536	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
4.2	96.0	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
4.0	95.8	GSM375788	Deep-sowing 10d treatment Control, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
3.9	95.7	GSM202413	Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep2	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
3.9	95.7	GSM258534	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
3.9	95.7	GSM202284	B73xMo17 11-day seedling aerial tissue biological replicate 2	GSE8174	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.9	95.7	GSM202282	B73 11-day seedling aerial tissue biological replicate 2	GSE8174	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-3	42	Zm.7059.1.S1_at	CD219109	3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase	-	8e-1	At4g36660	unknown protein	C.G.	S.X.	Please select
0.06	1e-2	40	Zm.4914.1.S1_at	CD437635	-	-	8e-4	At5g49330	AtMYB111 (myb domain protein 111)	C.G.	S.X.	Please select
0.03	2e-1	36	Zm.2968.1.A1_at	AY106977.1	adhesive/proline-rich protein	-	6e-3	At3g22240	unknown protein	C.G.	S.X.	Please select
0.03	2e-1	36	Zm.16464.1.A1_at	BQ538409	-	-	7e-2	At1g16610	SR45	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.8789.1.A1_at	CK347665	hypothetical protein LOC100192110	-	1e-1	At2g33510	protein binding	C.G.	S.X.	Please select
0.03	7e-1	34	Zm.6726.1.S1_x_at	AI395973	hypothetical protein AY106712	-	7e+0	At3g46090	ZAT7	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.5731.1.A1_at	BM378722	-	-	7e-1	At3g54560	HTA11	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.3216.1.S1_at	AJ006537	limonoid UDP-glucosyltransferase	-	1e-1	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select
0.03	7e-1	34	Zm.2352.1.S1_at	CF009846	hypothetical protein LOC100277532	-	3e-1	At5g63480	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At3g46110	823754	unknown protein	F:unknown;P:unknown;C:plasma membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	PsAffx.CL463Contig1_at	PsAffx.CL463Contig1	-	-	4e+0	At1g05340	unknown protein	C.G.	S.X.	Please select
0.35	2e-87	321	Hordeum vulgare	Contig8273_at	Contig8273	-	-	2e+0	At5g03170	FLA11	C.G.	S.X.	Please select
0.44	3e-96	353	Oryza sativa	Os01g0668100	AK105603.1	-	Beta-Ig-H3/fasciclin domain containing protein	1e-1	At3g57500	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	PtpAffx.113677.1.S1_at	CN192517	hypothetical protein	-	5e-31	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	7e-80	297	Triticum aestivum	Ta.17073.1.S1_at	CA617305	-	-	5e-1	At3g46110	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	34	Vitis vinifera	1611315_at	CF372467	hypothetical protein LOC100261906	-	6e-49	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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