CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.3236.1.S1_at

Gene name hypothetical protein LOC100279928

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.87 96.4 Zm.3236.1.S1_at BG837635 hypothetical protein LOC100279928 - 3e-1 At5g03350 legume lectin family protein S.X. H.G.
0.37 42.3 Zm.3653.1.A1_at AY109744.1 hypothetical protein LOC100276445 - 7e+0 At2g28405 LCR32 (Low-molecular-weight cysteine-rich 32) S.X. H.G.
0.33 36.0 Zm.5621.1.A1_at CK370677 hypothetical protein LOC100273111 - 3e+0 At2g33990 iqd9 (IQ-domain 9) S.X. H.G.
0.33 36.0 Zm.1263.1.A1_at AY108751.1 hypothetical protein LOC100274372 - 1e-7 At3g51820 G4 S.X. H.G.
0.31 31.6 Zm.16896.1.A1_s_at BM076061 hypothetical protein LOC100280314 - 5e+0 At1g01230 ORMDL family protein S.X. H.G.
0.29 28.1 Zm.5200.1.A1_at AY108333.1 - - 5e-1 At1g63900 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.20 14.2 Zm.2953.1.S1_at CF054623 hypothetical protein LOC100276099 - 3e-6 At5g13500 unknown protein S.X. H.G.
0.18 11.6 Zm.11846.1.A1_at CO526718 SBP-domain protein 7 - 5e+0 At1g72080 unknown protein S.X. H.G.
0.13 6.8 Zm.18283.1.A1_at BG841297 hypothetical protein LOC100217202 /// hypothetical protein LOC100217213 - 5e+0 At5g49540 unknown protein S.X. H.G.
0.13 6.8 Zm.2374.1.A1_at AI734567 hypothetical protein LOC100192983 - 3e+0 At3g46010 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 97.9 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
7.1 97.7 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.9 97.7 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.8 97.6 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.6 97.1 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.5 97.1 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.6 96.4 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.0 95.8 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.8 95.5 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5 95.1 GSM202319 Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-1 36 Zm.9667.1.A1_at BM341541 transcription factor MYB42 - 1e+0 At3g48490 unknown protein C.G. S.X.
0.01 5e-1 36 Zm.6489.1.A1_at AI692084 - - 7e-7 At5g58787 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 5e-1 36 Zm.12708.1.S1_at AI629588 - - 2e-3 At2g22170 lipid-associated family protein C.G. S.X.
0.01 5e-1 36 Zm.10008.1.A1_at BM332132 hypothetical protein LOC100276626 - 7e-3 At1g02816 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.4350.1.A1_at AW091239 - - 1e+0 At5g49334 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.3801.1.S1_x_at BU097753 hypothetical protein LOC100277001 - 7e-1 At4g01590 unknown protein C.G. S.X.
0.02 2e+0 34 Zm.14566.2.A1_at AW331115 photosystem II 11 kD protein - 9e-1 At3g21910 receptor-like protein kinase-related C.G. S.X.
0.02 2e+0 34 Zm.14566.2.A1_x_at AW331115 photosystem II 11 kD protein - 9e-1 At3g21910 receptor-like protein kinase-related C.G. S.X.
0.01 9e+0 32 Zm.90.1.A1_a_at AF004210.1 - - 4e+0 At5g26070 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 38 Arabidopsis thaliana At5g03350 831863 legume lectin family protein F:carbohydrate binding, sugar binding;P:biological_process unknown;C:apoplast, cell wall, chloroplast;PBO - - - C.G. S.X.
0.07 3e-5 52 Glycine max Gma.2229.1.S1_at CD407103 - - 4e-5 At4g21150 HAP6 (HAPLESS 6) C.G. S.X.
0.24 3e-58 226 Hordeum vulgare Contig11902_at Contig11902 - - 2e+0 At5g56750 Ndr family protein C.G. S.X.
0.68 0 872 Oryza sativa Os01g0911200 AK101333.1 - Ribophorin II family protein 1e-6 At4g21150 HAP6 (HAPLESS 6) C.G. S.X.
0.04 7e-3 44 Populus trichocarpa PtpAffx.129645.1.S1_at CA932058 hypothetical protein - 1e-13 At4g21150 HAP6 (HAPLESS 6) C.G. S.X.
0.15 6e-18 93 Triticum aestivum Ta.1309.1.S1_a_at BJ282817 - - 1e+0 At5g50960 NBP35 (NUCLEOTIDE BINDING PROTEIN 35) C.G. S.X.
0.10 7e-9 61 Vitis vinifera 1610929_at CA818496 - - 2e-2 At4g21150 HAP6 (HAPLESS 6) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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