Gene omics information

Query gene ID Zm.3135.1.S1_at
Gene name catalytic/ protein phosphatase type 2C
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.1Zm.3135.1.S1_atCD981826catalytic/ protein phosphatase type 2C-2e-13At1g47380protein phosphatase 2C-related / PP2C-relatedS.X.H.G.
0.8395.6Zm.16843.1.S1_atAI978092--2e-47At1g50370serine/threonine protein phosphatase, putativeS.X.H.G.
0.7792.1Zm.17572.2.S1_atCF972387heat- and acid-stable phosphoprotein-3e-8At5g46020unknown proteinS.X.H.G.
0.6785.8Zm.2163.1.S1_atAY105593.1--2e-4At3g59400GUN4S.X.H.G.
0.6077.8Zm.13620.1.A1_atCK369896--8e-6At2g37550AGD7S.X.H.G.
0.4251.3Zm.9984.1.A1_atCO529085Hypothetical protein LOC100217031-4e-4At1g65000unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.898.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.198.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.798.1GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.997.9GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.197.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.597.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.216e-55214Zm.17768.1.A1_atCK371588--3e+0At4g30845unknown proteinC.G.S.X.
0.015e+032Zm.9421.1.S1_atCF627701hypothetical protein LOC100216648-4e-2At3g27380SDH2-1C.G.S.X.
0.015e+032Zm.5530.1.A1_atAI629939hypothetical protein LOC100191845-1e-18At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)C.G.S.X.
0.025e+032Zm.4562.1.A1_atBM332111--3e-1At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.015e+032Zm.4283.2.A1_atAI001292--4e-26At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeC.G.S.X.
0.015e+032Zm.4283.2.S1_atAY109824.1--4e-26At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeC.G.S.X.
0.015e+032Zm.15107.1.A1_atCF273266--6e+0At5g36980-C.G.S.X.
0.025e+032Zm.12528.1.A1_atAI734581hypothetical protein LOC100274560-3e+0At5g50740metal ion bindingC.G.S.X.
0.015e+032Zm.1106.1.S1_atCF636956Hypothetical protein LOC100191289-2e-1At1g27950LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-1377Arabidopsis thalianaAt1g47380841141protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFBV---C.G.S.X.
0.163e-448Glycine maxGma.14414.1.S1_atBQ473444--1e-31At1g47380protein phosphatase 2C-related / PP2C-relatedC.G.S.X.
0.202e-27123Hordeum vulgareContig16753_atContig16753--1e+1At5g04820OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)C.G.S.X.
0.304e-78293Oryza sativaOs04g0449400CF324972-Calmodulin-binding protein phosphatase7e-5At1g09160protein phosphatase 2C-related / PP2C-relatedC.G.S.X.
0.085e-1273Populus trichocarpaPtpAffx.202064.1.S1_atpmrna4118hypothetical protein-6e-61At1g47380protein phosphatase 2C-related / PP2C-relatedC.G.S.X.
0.127e-26119Triticum aestivumTaAffx.112119.1.S1_atCA626894--4e-1At3g15610transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.028e-134Vitis vinifera1610161_atCK138135.1--3e-16At2g44620MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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