Gene omics information

Query gene ID	Zm.301.2.A1_x_at
Gene name	hypothetical protein LOC100276367
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.72	88.6	Zm.301.2.A1_x_at	CO521836	hypothetical protein LOC100276367	-	4e-9	At2g34510	-	S.X.	H.G.	Please select
0.28	28.1	Zm.2702.3.A1_at	CA404120	-	-	3e-2	At5g14440	-	S.X.	H.G.	Please select
0.25	21.3	Zm.14974.1.A1_at	CF602682	hypothetical protein LOC100276645	-	2e+1	At5g42070	unknown protein	S.X.	H.G.	Please select
0.23	18.6	Zm.609.1.S1_at	AF326497.1	small basic membrane intrinsic protein1a	-	9e+0	At5g63270	nitrate-responsive NOI protein, putative	S.X.	H.G.	Please select
0.22	16.9	Zm.19354.1.A1_at	CO532556	hypothetical protein LOC100279856	-	9e-1	At3g29050	receptor-like protein kinase-related	S.X.	H.G.	Please select
0.19	12.8	Zm.9990.1.A1_at	AY105402.1	protein SEY1	-	6e-16	At1g72960	root hair defective 3 GTP-binding (RHD3) family protein	S.X.	H.G.	Please select
0.19	12.8	Zm.9812.1.A1_at	BM339721	-	-	1e-19	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	S.X.	H.G.	Please select
0.18	11.6	Zm.18442.1.A1_at	CO532083	-	-	4e+0	At5g37475	translation initiation factor-related	S.X.	H.G.	Please select
0.18	11.6	Zm.747.1.A1_at	CF627612	hypothetical protein LOC100191588	-	3e-22	At1g16180	TMS membrane family protein / tumour differentially expressed (TDE) family protein	S.X.	H.G.	Please select
0.18	11.6	Zm.15487.1.S1_at	CD219309	MPK17-1 - putative MAPK	-	2e-51	At3g18040	MPK9 (MAP KINASE 9)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.2	98.2	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.5	98.1	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.5	98.1	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.4	98.1	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.0	98.0	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.8	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.7	97.9	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.6	97.9	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.5	97.8	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	2837	Zm.301.2.A1_at	CO521836	hypothetical protein LOC100276367	-	4e-9	At2g34510	-	C.G.	S.X.	Please select
0.70	0	1552	Zm.2385.2.A1_a_at	AY111554.1	DNA-binding protein	-	1e-15	At2g34510	-	C.G.	S.X.	Please select
0.70	0	1552	Zm.2385.2.A1_at	AY111554.1	hypothetical protein LOC100276100	-	1e-15	At2g34510	-	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.8760.1.S1_at	CK827613	phenazine biosynthesis protein	-	7e-4	At4g02860	catalytic	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.7579.1.A1_at	CO520294	hypothetical protein LOC100276241	-	3e+0	At4g29020	glycine-rich protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.6644.1.S1_at	AY104341.1	hypothetical protein LOC100191256	-	2e-4	At5g42050	-	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.14396.1.S1_at	AF147726.1	photosystem I subunit d1	-	1e-3	At1g03130	PSAD-2 (photosystem I subunit D-2)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.13604.1.A1_at	AY107633.1	Hypothetical protein LOC100192852	-	2e-1	At2g44770	phagocytosis and cell motility protein ELMO1-related	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.13604.1.S1_at	CD963810	hypothetical protein LOC100192852	-	2e-1	At2g44770	phagocytosis and cell motility protein ELMO1-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-9	63	Arabidopsis thaliana	At2g34510	818014	-	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	5e-12	73	Glycine max	GmaAffx.63408.1.S1_at	AW099756	-	-	5e-31	At1g29980	-	C.G.	S.X.	Please select
0.50	1e-152	539	Hordeum vulgare	Contig5845_at	Contig5845	-	-	3e-3	At2g34510	-	C.G.	S.X.	Please select
0.60	0	650	Oryza sativa	Os01g0756600	AK102373.1	-	Protein of unknown function DUF642 family protein	3e-16	At2g34510	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	2e-5	52	Populus trichocarpa	PtpAffx.6581.5.S1_at	CV237183	-	-	2e-3	At1g29980	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.41	1e-132	474	Triticum aestivum	Ta.2840.1.S1_at	BJ311413	-	-	4e+0	At1g58007	unknown protein	C.G.	S.X.	Please select
0.04	6e-5	48	Vitis vinifera	1609590_s_at	CB981725	hypothetical protein LOC100253669	-	3e-25	At2g34510	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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