Gene omics information

Query gene ID	Zm.301.1.A1_a_at
Gene name	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor homolog1
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.301.1.A1_a_at	BM334689	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor homolog1	-	2e+1	Atcg01270	-	S.X.	H.G.	Please select
0.67	85.8	Zm.11637.1.A1_at	BM379485	-	-	5e-7	At5g47910	RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)	S.X.	H.G.	Please select
0.67	85.8	Zm.4433.1.S1_at	AY108076.1	G-patch domain containing protein	-	4e-2	At3g09850	D111/G-patch domain-containing protein	S.X.	H.G.	Please select
0.55	71.6	Zm.5777.1.A1_at	AI649584	hypothetical protein LOC100273681	-	7e+0	At4g30660	hydrophobic protein, putative / low temperature and salt responsive protein, putative	S.X.	H.G.	Please select
0.46	58.4	Zm.5097.1.A1_at	BM379001	PAC	-	9e-18	At2g48120	PAC (PALE CRESS)	S.X.	H.G.	Please select
0.38	44.2	Zm.4852.2.A1_at	AI770453	Hypothetical protein LOC100192969	-	3e+0	At3g16300	integral membrane family protein	S.X.	H.G.	Please select
0.27	24.6	Zm.5776.1.A1_at	CO520963	hypothetical protein LOC100273913	-	9e-2	At2g47140	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.2	98.5	GSM320442	protocol: mRNA - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320446	protocol: mRNA - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM385710	Deep-sowing 10d treatment TIBA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.4	97.8	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.0	97.7	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.0	97.7	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
6.9	97.7	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320441	protocol: mRNA - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM375788	Deep-sowing 10d treatment Control, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.1	97.4	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-29	129	Zm.3384.1.A1_a_at	BI319306	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor CI-1B	-	9e+0	At5g65687	transporter-related	C.G.	S.X.	Please select
0.20	1e-29	129	Zm.3384.1.A1_x_at	BI319306	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor CI-1B	-	9e+0	At5g65687	transporter-related	C.G.	S.X.	Please select
0.21	1e-29	129	Zm.15278.1.S1_at	BM380074	hypothetical protein LOC100278126	-	1e+1	At4g16380	metal ion binding	C.G.	S.X.	Please select
0.03	4e-2	38	Zm.16848.2.A1_at	CD437503	hypothetical protein LOC100193258	-	1e-7	At3g22230	60S ribosomal protein L27 (RPL27B)	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.16848.1.A1_at	CK369421	hypothetical protein LOC100193258	-	6e-10	At4g15000	60S ribosomal protein L27 (RPL27C)	C.G.	S.X.	Please select
0.03	4e-2	38	Zm.15490.1.A1_at	CD448845	subtilisin-chymotrypsin inhibitor CI-1B	-	4e+0	At5g38930	germin-like protein, putative	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.4708.1.A1_at	AI738326	CAK1AT	-	6e-4	At4g28980	cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.16203.1.A1_at	AY104535.1	-	-	2e-13	At4g15000	60S ribosomal protein L27 (RPL27C)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.1488.1.S1_at	BM079309	seven-transmembrane-domain protein 1	-	2e-7	At1g21460	nodulin MtN3 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+1	30	Arabidopsis thaliana	Atcg01270	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.C272000006_at	PsAffx.C272000006	-	-	4e+0	At4g24700	unknown protein	C.G.	S.X.	Please select
0.25	1e-11	69	Hordeum vulgare	AF427791_CDS-25_at	AF427791_CDS-25	-	-	2e+1	Atmg00680	-	C.G.	S.X.	Please select
0.23	1e-36	155	Oryza sativa	Os.36283.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.222673.1.S1_at	pmrna40227	NAC domain protein, IPR003441	-	4e-3	At5g64060	anac103 (Arabidopsis NAC domain containing protein 103)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.69	0	646	Triticum aestivum	TaAffx.113766.1.S1_at	CA605482	-	-	1e+1	At5g35737	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1614641_at	CD800861	-	-	3e+0	At2g27410	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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