CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2805.1.A1_at

Gene name hypothetical protein LOC100274443

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.2805.1.A1_at AW352682 hypothetical protein LOC100274443 - 5e+0 At4g13266 unknown protein S.X. H.G.
0.67 85.8 Zm.11787.1.A1_a_at BM380772 - - 6e+0 At5g17523 - S.X. H.G.
0.63 81.1 ZmAffx.105.1.S1_at AI665537 - - 3e+0 At4g20000 VQ motif-containing protein S.X. H.G.
0.55 71.6 Zm.5813.1.A1_at CF056763 hypothetical protein LOC100191474 - 8e-32 At5g55310 TOP1BETA (DNA TOPOISOMERASE 1 BETA) S.X. H.G.
0.50 65.7 ZmAffx.901.1.A1_at AI770894 - - 1e+1 At5g47455 unknown protein S.X. H.G.
0.38 44.2 Zm.15937.1.A1_at CO520791 - - 5e+0 At3g25200 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.7 98.1 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
7.1 97.7 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.2 97.4 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.2 97.4 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.2 97.4 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.4 96.2 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.1 95.9 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0 94.0 GSM202319 Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 5e-109 393 Zm.4098.1.A1_at BM351284 - - 1e-12 At1g04810 26S proteasome regulatory subunit, putative C.G. S.X.
0.04 8e-3 40 Zm.2706.1.A1_at BM335618 - - 3e-43 At2g32730 26S proteasome regulatory subunit, putative C.G. S.X.
0.02 1e-1 36 Zm.9778.1.A1_at BM338606 outer envelope protein - 3e-3 At2g43950 OEP37 C.G. S.X.
0.01 1e-1 36 Zm.5643.1.A1_at AY425817.1 mitogen activated protein kinase 6 - 6e-55 At5g19010 MPK16 C.G. S.X.
0.03 1e-1 36 Zm.1851.1.A1_at AW562373 - - 3e-1 At5g23030 TET12 (TETRASPANIN12) C.G. S.X.
0.02 5e-1 34 Zm.6045.7.A1_at CK347781 hypothetical protein LOC100216946 - 3e-8 At1g18080 ATARCA C.G. S.X.
0.02 5e-1 34 Zm.6045.7.A1_a_at CK347781 hypothetical protein LOC100216946 /// guanine nucleotide-binding protein beta subunit-like protein - 3e-8 At1g18080 ATARCA C.G. S.X.
0.02 5e-1 34 Zm.19310.1.S1_at BM078335 hypothetical protein LOC100277077 - 1e-11 At5g22790 RER1 (RETICULATA-RELATED 1) C.G. S.X.
0.01 5e-1 34 Zm.12777.1.A1_at CA402980 - - 3e+0 At3g06780 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At4g13266 2745706 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.05 1e-1 38 Glycine max GmaAffx.44544.1.S1_s_at BE583950 - - 3e-3 At5g51820 PGM (PHOSPHOGLUCOMUTASE) C.G. S.X.
0.09 2e-3 42 Hordeum vulgare Contig9627_at Contig9627 - - 3e-31 At2g32730 26S proteasome regulatory subunit, putative C.G. S.X.
0.06 2e-22 107 Oryza sativa Os08g0224700 AK121754.1 - 26S proteasome subunit RPN2a 5e-90 At2g32730 26S proteasome regulatory subunit, putative C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.86204.1.S1_s_at AJ776253 hypothetical protein - 3e-1 At2g40180 ATHPP2C5 C.G. S.X.
0.08 6e-9 61 Triticum aestivum Ta.8245.1.S1_at CD922906 - - 2e-35 At1g04810 26S proteasome regulatory subunit, putative C.G. S.X.
0.04 6e+0 30 Vitis vinifera 1621664_x_at AY427084.1 - - 2e-1 At4g10780 disease resistance protein (CC-NBS-LRR class), putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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