Gene omics information

Query gene ID Zm.2789.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.0Zm.2789.1.A1_atCO518764--5e+0At2g39960microsomal signal peptidase 25 kDa subunit, putative (SPC25)S.X.H.G.
0.5065.7Zm.1382.1.S1_atBQ528972hypothetical protein LOC100194328-1e-1At4g33130-S.X.H.G.
0.4658.4Zm.8900.1.A1_atCK827399hypothetical protein LOC100272787-2e-13At1g11750CLPP6S.X.H.G.
0.4658.4Zm.4271.2.A1_atAY103821.1Isoflavone reductase-like1-2e-20At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)S.X.H.G.
0.3844.2Zm.5533.1.A1_atBM075731hypothetical protein LOC100193863-7e-2At1g27220paired amphipathic helix repeat-containing proteinS.X.H.G.
0.3641.3Zm.5031.1.A1_atAI600468--2e-2At5g62160AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)S.X.H.G.
0.3336.0Zm.17902.1.A1_atCK786798--3e+0At5g65350histone H3S.X.H.G.
0.3029.8Zm.17822.1.A1_atCO521652hypothetical protein LOC100193034-6e+0At4g14104unknown proteinS.X.H.G.
0.2928.1Zm.5237.1.A1_atAY107290.1hypothetical protein LOC100273890-2e-19At1g47260GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.699.2GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
15.799.0GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
10.898.5GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
8.698.1GSM385708Deep-sowing 10d treatment IAA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.497.8GSM375796Deep-sowing 10d treatment GA3, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.597.5GSM385707Deep-sowing 10d treatment IAA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
5.597.1GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
5.497.0GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
5.296.9GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.296.0GSM258531Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1GSE10243Profiling expression changes caused by a segmental aneuploid in maize
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.191e-23109Zm.9456.1.A1_atBM341648hypothetical protein LOC100191738-5e+0At4g28020unknown proteinC.G.S.X.
0.077e-1993Zm.4386.1.A1_atBM380831--5e-3At2g26250KCS10 (3-KETOACYL-COA SYNTHASE 10)C.G.S.X.
0.091e-1789Zm.11974.1.A1_atAY105739.1hypothetical protein LOC100191621-8e-6At1g25450KCS5 (3-KETOACYL-COA SYNTHASE 5)C.G.S.X.
0.202e-1271Zm.4664.2.A1_atAI737871--5e-3At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.096e-444Zm.4664.1.A1_atAI737885fatty acid elongase-2e-1At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.059e-340Zm.13586.1.S1_atAY107833.13-ketoacyl-CoA synthase-6e-1At1g68530KCS6 (3-KETOACYL-COA SYNTHASE 6)C.G.S.X.
0.033e-238Zm.14384.1.A1_atCK144440hypothetical protein LOC100191907-1e-1At3g25850DC1 domain-containing proteinC.G.S.X.
0.011e-136Zm.6988.1.S1_atAI973474glyceraldehyde phosphate dehydrogenase B1-3e-10At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)C.G.S.X.
0.011e-136Zm.295.1.A1_atAI065608fae2 protein-2e-20At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt2g39960818583microsomal signal peptidase 25 kDa subunit, putative (SPC25)F:peptidase activity;P:signal peptide processing;C:endoplasmic reticulum;MPFO---C.G.S.X.
0.111e-448Glycine maxGmaAffx.73570.1.S1_atBG316320--4e-22At1g01120KCS1 (3-KETOACYL-COA SYNTHASE 1)C.G.S.X.
0.375e-66250Hordeum vulgareHVSMEn0002B08r2_atHVSMEn0002B08r2--2e+1At5g37720RNA and export factor-binding protein, putativeC.G.S.X.
0.173e-120432Oryza sativaOs10g0472900AK120294.1-Naringenin-chalcone synthase family protein3e-2At1g07720KCS3 (3-KETOACYL-COA SYNTHASE 3)C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.59055.1.A1_atCV228853--4e+0At3g57730protein kinase, putativeC.G.S.X.
0.121e-963Triticum aestivumTa.25256.1.A1_atCD454339--3e-1At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.036e+030Vitis vinifera1614500_atCD801598--2e-1At2g38760ANNAT3 (ANNEXIN ARABIDOPSIS 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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