CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2770.1.A1_at

Gene name hypothetical protein LOC100192561

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.2 Zm.2770.1.A1_at BM380104 hypothetical protein LOC100192561 - 1e+0 At2g17860 pathogenesis-related thaumatin family protein S.X. H.G.
0.67 85.8 Zm.19215.2.S1_at BG321066 - - 2e-12 At1g30480 DRT111 S.X. H.G.
0.57 75.1 Zm.10141.1.A1_at AY108995.1 esterase - 2e+0 At4g38690 1-phosphatidylinositol phosphodiesterase-related S.X. H.G.
0.55 71.6 Zm.12510.1.S1_at AW056992 - - 5e+0 At1g76955 Expressed protein S.X. H.G.
0.50 65.7 Zm.8732.1.A1_at BM347474 esterase - 3e+0 At5g53030 unknown protein S.X. H.G.
0.46 58.4 Zm.7765.1.A1_at BQ539662 - - 3e-1 At1g53170 ERF8 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.2 99.1 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
15.6 99.0 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
15.2 98.9 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.1 98.5 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.0 98.5 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.7 98.3 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
8.3 98.0 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.7 97.9 GSM206292 Upper pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.7 97.2 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.6 97.1 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 36 Zm.7734.1.A1_at BM334368 hypothetical protein LOC100193498 - 3e-5 At5g26170 WRKY50 C.G. S.X.
0.03 1e-1 36 Zm.17613.1.A1_at CK368144 - - 5e+0 Atmg00530 - C.G. S.X.
0.02 5e-1 34 Zm.705.1.S1_at BG842406 - - 4e-2 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 5e-1 34 Zm.5003.2.A1_at CO518270 - - 9e-2 At4g25570 ACYB-2 C.G. S.X.
0.03 5e-1 34 Zm.5003.2.S1_at CO518270 - - 9e-2 At4g25570 ACYB-2 C.G. S.X.
0.03 5e-1 34 Zm.5003.2.A1_a_at CO518270 hypothetical protein LOC100273009 - 9e-2 At4g25570 ACYB-2 C.G. S.X.
0.03 5e-1 34 Zm.5003.2.A1_x_at CO518270 - - 9e-2 At4g25570 ACYB-2 C.G. S.X.
0.02 5e-1 34 Zm.17696.1.A1_at BM073027 - - 2e-3 At4g31470 pathogenesis-related protein, putative C.G. S.X.
0.03 2e+0 32 ZmAffx.436.1.A1_at AI676954 - - 2e-1 At5g38140 NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At2g17860 816296 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV - - - C.G. S.X.
0.04 3e-2 40 Glycine max Gma.8330.1.S1_at BU550645 - - 4e-11 At1g20030 pathogenesis-related thaumatin family protein C.G. S.X.
0.03 9e-3 40 Hordeum vulgare Contig13693_at Contig13693 - - 1e+0 At2g20835 unknown protein C.G. S.X.
0.15 4e-20 99 Oryza sativa Os10g0412700 AK110572.1 - Thaumatin, pathogenesis-related family protein 2e-3 At1g75030 ATLP-3 C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.97025.1.S1_at CK104066 - - 9e-1 At3g15020 malate dehydrogenase (NAD), mitochondrial, putative C.G. S.X.
0.33 1e-22 107 Triticum aestivum Ta.16257.1.S1_at CA603509 - - 3e+0 At1g46768 RAP2.1 (related to AP2 1) C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1615135_at CD797887 - - 1e+1 At5g41992 CPuORF58 (Conserved peptide upstream open reading frame 58) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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