Gene omics information

Query gene ID	Zm.2763.1.S1_at
Gene name	hypothetical protein LOC100191545
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.2763.1.S1_at	AW067129	hypothetical protein LOC100191545	-	9e-7	At1g19710	glycosyl transferase family 1 protein	S.X.	H.G.	Please select
0.67	85.8	Zm.13940.1.S1_at	AI677337	hypothetical protein LOC100193246	-	1e+0	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	S.X.	H.G.	Please select
0.60	77.8	Zm.6275.1.S1_a_at	AF540907.1	benzoxazin6	-	7e-1	At1g06640	2-oxoglutarate-dependent dioxygenase, putative	S.X.	H.G.	Please select
0.57	75.1	ZmAffx.774.1.A1_at	AI746198	hypothetical protein LOC100279501	-	2e+0	At2g41000	heat shock protein binding	S.X.	H.G.	Please select
0.50	65.7	Zm.4848.2.S1_a_at	AI770366	SIR2-like histone deacetylase	-	2e-1	At5g55760	SRT1 (sirtuin 1)	S.X.	H.G.	Please select
0.40	48.5	Zm.13228.1.S1_at	CA452580	LHT1	-	5e+0	At4g17585	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.8	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM205372	B73xMo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	4e-1	36	Zm.873.1.S1_at	AW067411	-	-	3e-16	At4g38230	CPK26	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.4316.1.S1_a_at	AI881448	hypothetical protein LOC100273812 /// cleavage and polyadenylation specificity factor 5	-	1e-39	At4g25550	protein binding	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.4316.1.S1_at	AI881448	hypothetical protein LOC100273812	-	1e-39	At4g25550	protein binding	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.798.2.S1_at	CO528512	hypothetical protein LOC100194211	-	2e-13	At4g37470	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.798.1.S1_a_at	AY105548.1	hypothetical protein LOC100194211	-	2e-12	At4g37470	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.2999.1.A1_at	CF632191	hypothetical protein LOC100193783	-	2e-9	At5g18110	NCBP (NOVEL CAP-BINDING PROTEIN)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.2977.1.A1_at	AW155840	-	-	1e-5	At2g40280	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.17323.1.S1_at	CK370311	protein binding protein	-	3e-1	At1g76820	GTP binding / GTPase	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.14846.1.S1_at	CF002624	hypothetical protein LOC100279572	-	5e-17	At3g04830	binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	9e-7	56	Arabidopsis thaliana	At1g19710	838559	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:Golgi apparatus;BOAMPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-7	57	Glycine max	Gma.17447.2.S1_at	BU926885	-	-	5e-2	At1g71310	unknown protein	C.G.	S.X.	Please select
0.58	0	999	Hordeum vulgare	Contig9017_at	Contig9017	-	-	2e-7	At1g19710	glycosyl transferase family 1 protein	C.G.	S.X.	Please select
0.33	2e-120	434	Oryza sativa	Os01g0262600	NM_187974.1	-	Glycosyl transferase, group 1 domain containingprotein	1e-3	At1g19710	glycosyl transferase family 1 protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	5e-9	63	Populus trichocarpa	PtpAffx.12089.2.A1_a_at	CK091083	hypothetical protein	-	1e-47	At1g19710	glycosyl transferase family 1 protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.50	7e-171	601	Triticum aestivum	TaAffx.120728.1.S1_at	CA645229	-	-	2e-6	At1g75420	glycosyl transferase family 1 protein	C.G.	S.X.	Please select
0.07	3e-16	85	Vitis vinifera	1610002_at	CB977330	hypothetical protein LOC100257473	-	4e-23	At1g19710	glycosyl transferase family 1 protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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