Gene omics information

Query gene ID Zm.2653.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.2653.1.A1_atBM073552--7e+0At4g37409unknown proteinS.X.H.G.
0.7389.9Zm.265.1.A1_atU38791.1hypothetical protein LOC100279974-5e+0At5g62040brother of FT and TFL1 protein (BFT)S.X.H.G.
0.7188.2Zm.2652.1.A1_atAW066710--1e+1At5g18020auxin-responsive protein, putativeS.X.H.G.
0.6785.8Zm.2648.1.A1_atAY104745.1hypothetical protein LOC100216957-3e-3At4g26740ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)S.X.H.G.
0.6179.5Zm.3866.1.S1_atCK370021D-amino acid oxidase-3e+0At1g51760IAR3 (IAA-ALANINE RESISTANT 3)S.X.H.G.
0.2724.6Zm.5950.1.A1_atBG837473hypothetical protein LOC100216987-9e-3At3g56480myosin heavy chain-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.897.2GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM202405Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep5GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
4.496.2GSM202404Zmet2 study 11-day seedling aerial tissue genotype B73 Rep5GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
4.296.0GSM202286B73 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
4.195.9GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.595.1GSM202288B73xMo17 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.294.5GSM202287Mo17xB73 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.294.5GSM202406Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
3.294.5GSM202278B73 11-day seedling aerial tissue biological replicate 1GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.194.3GSM253262ZM_4d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.510775Zm.2503.1.A1_atAW231353--2e-3At2g48080oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.022e-136Zm.9490.1.A1_atBM381005hypothetical protein LOC100277225-5e+0At5g5795026S proteasome regulatory subunit, putativeC.G.S.X.
0.012e-136Zm.6466.1.A1_atAF272750.1kinesin-like protein2-2e-5At1g18370HIK (HINKEL)C.G.S.X.
0.018e-134Zm.300.1.A1_atAY107888.1polyamine oxidase1-1e+1At5g15600SP1L4 (SPIRAL1-LIKE4)C.G.S.X.
0.023e+032Zm.8328.1.A1_atBI596217hypothetical protein LOC100276055 /// hypothetical protein LOC100277949-4e-1At5g40630ubiquitin family proteinC.G.S.X.
0.013e+032Zm.5791.1.A1_atAY103953.1suppressor of G2 allele of SKP1-9e-7At4g23570SGT1AC.G.S.X.
0.023e+032Zm.5511.1.A1_atCO528493--5e-1At2g45530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.013e+032Zm.34.1.A2_a_atAY109329.1Hypothetical protein LOC100192755-9e-2At2g36950heavy-metal-associated domain-containing proteinC.G.S.X.
0.013e+032Zm.34.1.A1_x_atAF371261.1opaque2 modifier-9e-2At2g36950heavy-metal-associated domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Arabidopsis thalianaAt4g374096240256unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.033e+034Glycine maxPsAffx.psHB004xF08f_s_atPsAffx.psHB004xF08f--3e+0At1g53950ubiquitin family proteinC.G.S.X.
0.242e-38159Hordeum vulgareContig7235_atContig7235--6e-8At4g02940oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.284e-49196Oryza sativaOs05g0401500AK058850.1-2OG-Fe(II) oxygenase domain containing protein4e-9At4g02940oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.036e-136Populus trichocarpaPtpAffx.209232.1.S1_s_atpmrna18252hypothetical protein-5e-1At5g51870AGL71 (AGAMOUS-LIKE 71)C.G.S.X.
0.313e-48192Triticum aestivumTa.9123.1.A1_s_atBG906447--8e+0At4g37409unknown proteinC.G.S.X.
0.029e+030Vitis vinifera1618018_atCF403362hypothetical protein LOC100257171-4e+0At4g21570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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