CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2647.1.A1_at

Gene name hypothetical protein LOC100192886

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.2647.1.A1_at BG268724 hypothetical protein LOC100192886 - 1e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related S.X. H.G.
0.77 92.1 Zm.4725.1.A1_at AI738202 Hypothetical protein LOC100194011 - 4e+0 At5g28821 unknown protein S.X. H.G.
0.77 92.1 Zm.4164.3.A1_a_at CF636517 - - 6e+0 At5g36722 unknown protein S.X. H.G.
0.67 85.8 Zm.5016.1.A1_at CF630064 - - 2e-19 At2g04030 CR88 S.X. H.G.
0.60 77.8 Zm.14649.1.A1_at CB351077 - - 5e+0 At3g58070 GIS (GLABROUS INFLORESCENCE STEMS) S.X. H.G.
0.35 38.9 Zm.4524.1.A1_at CD971358 - - 1e+1 At4g00420 double-stranded RNA-binding domain (DsRBD)-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.7 98.8 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
13.6 98.8 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.2 98.6 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.9 98.5 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.7 97.2 GSM206308 Lower pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.0 96.7 GSM320443 protocol: mRNA - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9 96.7 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.7 96.5 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM206328 Upper pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.5 96.3 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-15 81 Zm.6067.2.A1_at CA401344 hypothetical protein LOC100277938 - 9e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.06 2e-13 75 Zm.6067.1.S1_at CA398401 - - 6e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 9e-13 73 Zm.10202.1.A1_at AY112463.1 farnesylated protein 1 - 3e-8 At5g66110 metal ion binding C.G. S.X.
0.05 8e-7 54 Zm.11872.1.A1_at BM381418 metal ion binding protein - 7e-2 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 3e-6 52 Zm.34.5.A1_at AI734535 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.04 3e-6 52 Zm.34.5.A1_x_at AI734535 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 1e-5 50 Zm.34.1.A2_a_at AY109329.1 Hypothetical protein LOC100192755 - 9e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 1e-5 50 Zm.34.1.A1_x_at AF371261.1 opaque2 modifier - 9e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 5e-5 48 Zm.3655.1.S1_at BU037691 - - 1e-2 At1g05300 ZIP5 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-4 48 Arabidopsis thaliana At1g22990 838907 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFM - - - C.G. S.X.
0.06 4e-2 40 Glycine max Gma.17971.2.S1_s_at AW310947 - - 9e-1 At1g68905 - C.G. S.X.
0.32 6e-48 190 Hordeum vulgare Contig3058_at Contig3058 - - 2e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.36 5e-61 236 Oryza sativa OsAffx.6821.1.S1_x_at - - - 0 C.G. S.X.
0.03 6e-1 36 Populus trichocarpa PtpAffx.210669.1.S1_x_at pmrna20922 - - 1e-22 At5g50740 metal ion binding C.G. S.X.
0.24 4e-23 109 Triticum aestivum TaAffx.40.1.S1_at AJ615341 - - 8e-5 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.07 2e-6 52 Vitis vinifera 1618647_x_at CK138177.1 - - 4e-6 At5g60800 heavy-metal-associated domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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