CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2613.1.A1_at

Gene name sucrose-phosphatase1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.1 Zm.2613.1.A1_at AF283564.2 sucrose-phosphatase1 - 4e-15 At2g35840 sucrose-phosphatase 1 (SPP1) S.X. H.G.
0.67 85.8 Zm.16829.2.S1_at AY105706.1 hypothetical protein LOC100277102 - 5e-4 At4g33985 unknown protein S.X. H.G.
0.19 12.8 Zm.1338.1.A1_at AY107813.1 - - 6e+0 At5g15350 plastocyanin-like domain-containing protein S.X. H.G.
0.17 10.6 Zm.2654.2.S1_a_at CF040564 ubiquilin-1 - 5e-12 At2g17200 ubiquitin family protein S.X. H.G.
0.10 4.6 Zm.4.2.A1_at CA401225 - - 2e-3 At5g11860 NLI interacting factor (NIF) family protein S.X. H.G.
0.03 1.1 Zm.14903.1.A1_at CF634216 Asparagine synthetase 4 - 1e-4 At3g47340 ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.5 97.5 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
6.1 97.4 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
5.5 97.1 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
4.0 95.8 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.0 94.0 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0 94.0 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-4 48 Zm.8470.1.S1_at AF493561.1 sucrose-phosphatase - 4e+0 At5g17220 ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12) C.G. S.X.
0.01 2e-2 40 Zm.5668.2.A1_at BM078778 protein disulfide isomerase - 4e-8 At2g47470 UNE5 (UNFERTILIZED EMBRYO SAC 5) C.G. S.X.
0.01 4e-1 36 Zm.6555.2.S1_at CD446565 hypothetical protein LOC100273907 - 1e-31 At3g11710 ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1) C.G. S.X.
0.01 1e+0 34 Zm.9701.1.A1_at BM350818 hypothetical protein LOC100274130 - 4e-1 At1g32070 ATNSI (NUCLEAR SHUTTLE INTERACTING) C.G. S.X.
0.01 1e+0 34 Zm.16142.1.S1_at CF243882 hypothetical protein LOC100194402 - 9e-1 At5g51210 OLEO3 (OLEOSIN3) C.G. S.X.
0.01 6e+0 32 ZmAffx.905.1.A1_at AI770915 - - 2e-13 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.01 6e+0 32 ZmAffx.905.1.S1_at AI770915 - - 1e-11 At2g20300 ALE2 (Abnormal Leaf Shape 2) C.G. S.X.
0.01 6e+0 32 ZmAffx.1205.1.A1_at BE129629 - - 8e-1 At2g28920 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 6e+0 32 ZmAffx.1205.1.S1_at BE129629 - - 8e-1 At2g28920 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 4e-15 83 Arabidopsis thaliana At2g35840 818157 sucrose-phosphatase 1 (SPP1) F:phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity;P:response to cadmium ion, sucrose biosynthetic process;C:nucleus, cytoplasm;BPO - - - C.G. S.X.
0.15 5e-9 63 Glycine max GmaAffx.42874.1.S1_at CA800103 - - 7e-14 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
0.57 0 833 Hordeum vulgare Contig2724_s_at Contig2724 - - 1e-18 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
0.64 0 1043 Oryza sativa Os02g0143100 AK063330.1 - Sucrose-phosphatase (EC 3.1.3.24) 4e-9 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
0.24 3e-10 67 Populus trichocarpa PtpAffx.206440.1.S1_at pmrna12783 hypothetical protein - 8e-53 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
0.57 0 908 Triticum aestivum Ta.274.1.S1_at AF321557.1 sucrose-6F-phosphate phosphohydrolase SPP2 - 4e-18 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
0.23 3e-13 75 Vitis vinifera 1608257_at CB975800 hypothetical protein LOC100258115 - 1e-34 At2g35840 sucrose-phosphatase 1 (SPP1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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