Gene omics information

Query gene ID Zm.2549.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.2549.1.A1_atBM336803--2e+1At3g49230unknown proteinS.X.H.G.
0.8395.6Zm.4423.1.A1_atAI714792hypothetical protein LOC100191726-1e-3At4g31170protein kinase family proteinS.X.H.G.
0.8094.0Zm.3737.1.A1_atAW052994--1e-2At1g72820mitochondrial substrate carrier family proteinS.X.H.G.
0.8094.0Zm.16530.3.S1_atCF634413--1e-72At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)S.X.H.G.
0.7389.9Zm.19144.1.A1_atCO518283hypothetical protein LOC100217274-1e+0At5g58860CYP86A1 (CYTOCHROME P450 86 A1)S.X.H.G.
0.4251.3Zm.3311.1.A1_atAY105628.1--6e+0At5g53670unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.499.9GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
19.699.3GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
16.399.0GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
15.799.0GSM202400Zmet2 study 11-day seedling aerial tissue genotype B73 Rep4GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
14.698.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.798.8GSM202401Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep4GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
11.698.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.298.4GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
8.998.2GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
7.897.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-1375Zm.8614.1.A1_atBM341063--1e-1At4g01640-C.G.S.X.
0.025e-134Zm.10778.1.A1_a_atCF627974FIP1-4e-1At4g40100ABA-responsive protein-relatedC.G.S.X.
0.025e-134Zm.10778.1.A1_atCF627974FIP1-4e-1At4g40100ABA-responsive protein-relatedC.G.S.X.
0.012e+032Zm.423.1.S1_atAF019297.1starch synthase isoform zSTSII-2-3e-7At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.038e+030ZmAffx.1188.1.A1_atBE025244--3e+0At5g46620unknown proteinC.G.S.X.
0.038e+030ZmAffx.1188.1.S1_atBE025244--3e+0At5g46620unknown proteinC.G.S.X.
0.018e+030Zm.8507.1.A1_atBM074458hypothetical protein LOC100276220-8e-1At4g20280TAF11 (TBP-ASSOCIATED FACTOR 11)C.G.S.X.
0.028e+030Zm.5824.1.A1_atAI649789--2e+0At5g10680calmodulin-binding protein-relatedC.G.S.X.
0.028e+030Zm.5375.1.A1_atAY107376.1beta-glucosidase-2e-6At3g18080BGLU44 (B-S GLUCOSIDASE 44)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+130Arabidopsis thalianaAt3g49230824084unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.033e+130Glycine maxPsAffx.psZS007xH08f_s_atPsAffx.psZS007xH08f--2e-1At2g27580zinc finger (AN1-like) family proteinC.G.S.X.
0.039e+030Hordeum vulgareContig7699_atContig7699--2e-2At1g62370zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+034Oryza sativaOs11g0445300AK073557.1-Protein kinase domain containing protein2e-5At5g06740lectin protein kinase family proteinC.G.S.X.
0.033e+130Populus trichocarpaPtpAffx.9072.1.S1_atCK091402--4e-8At3g27250unknown proteinC.G.S.X.
0.031e+034Triticum aestivumTa.25122.1.S1_atCA606073--4e+0At1g56530hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.032e+128Vitis vinifera1622692_atCD801402--9e+0At5g48953LCR86 (Low-molecular-weight cysteine-rich 86)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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