Gene omics information

Query gene ID	Zm.2517.3.A1_x_at
Gene name	zein polypeptidesL2b
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.2517.3.A1_x_at	AF371272.1	zein polypeptidesL2b	-	9e-1	At5g62360	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.12165.1.A1_at	BI595866	ABC-type Co2+ transport system, permease component	-	4e-1	At1g15900	unknown protein	S.X.	H.G.	Please select
0.38	44.2	Zm.13187.2.A1_at	CF628617	-	-	1e+0	At5g11860	NLI interacting factor (NIF) family protein	S.X.	H.G.	Please select
0.31	31.6	Zm.18133.1.A1_at	AY103981.1	-	-	8e-38	At1g78570	RHM1 (RHAMNOSE BIOSYNTHESIS 1)	S.X.	H.G.	Please select
0.19	12.8	Zm.4812.1.A1_at	BG873771	-	-	6e+0	At5g26220	ChaC-like family protein	S.X.	H.G.	Please select
0.17	10.6	Zm.9290.1.A1_at	AY108360.1	hypothetical protein LOC100192546	-	7e-1	At5g58260	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.2	99.2	GSM205423	B73xMo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.9	99.1	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.0	99.0	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
15.5	99.0	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
15.3	98.9	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.5	98.9	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.4	98.9	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.0	98.8	GSM205421	B73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.9	98.8	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.7	98.8	GSM205436	B73xMo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.95	0	821	Zm.2517.3.A1_at	AF371272.1	zein /// zein polypeptidesL2b	-	9e-1	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.52	0	634	Zm.2517.2.A1_x_at	M29627.1	hypothetical protein LOC100101518	-	2e+0	At3g03460	unknown protein	C.G.	S.X.	Please select
0.58	7e-160	561	Zm.13345.2.A1_x_at	CD435730	hypothetical protein LOC100279020	-	2e+0	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.46	3e-159	559	Zm.2517.1.A1_at	AF371269.1	zein polypeptidesL2b	-	2e+0	At3g03460	unknown protein	C.G.	S.X.	Please select
0.80	4e-155	545	Zm.13345.6.A1_x_at	CA402028	hypothetical protein LOC100279020	-	2e-2	At2g30310	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.49	6e-151	531	Zm.13345.5.A1_x_at	BM337190	z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100275744 /// hypothetical protein LOC100279024 /// Zein-alpha PMS2	-	2e+0	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.59	6e-148	521	Zm.13345.4.A1_x_at	CD446527	hypothetical protein LOC100279020	-	2e+0	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.48	2e-147	519	Zm.2517.5.A1_x_at	CD437198	z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100274904 /// zein polypeptidesL2b	-	2e+0	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.57	2e-144	510	Zm.2517.4.A1_x_at	CA399084	z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100274904 /// zein polypeptidesL2b	-	2e+0	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	9e-1	34	Arabidopsis thaliana	At5g62360	836357	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.44139.1.S1_at	AW756154	-	-	2e+0	At5g38195	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	Contig24203_at	Contig24203	-	-	1e+1	At5g27090	AGL54	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	Os02g0138500	9630.m00372	-	Hypothetical protein	6e-5	At5g15740	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e+0	34	Populus trichocarpa	PtpAffx.69926.1.A1_at	CV238468	-	-	5e-3	At1g03820	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.74	3e-142	504	Triticum aestivum	Ta.20789.1.S1_x_at	CA619091	-	-	8e-1	At3g54170	ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)	C.G.	S.X.	Please select
0.04	3e-1	34	Vitis vinifera	1609411_at	CB970858	hypothetical protein LOC100248459	-	5e+0	At5g28491	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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