Gene omics information

Query gene ID Zm.24.2.S1_a_at
Gene name viviparous1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.24.2.S1_a_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinS.X.H.G.
0.7792.1Zm.264.2.A1_x_atCF012670acetyl-coenzyme A carboxylase-8e+0At5g02890transferase family proteinS.X.H.G.
0.7188.2Zm.24.2.S1_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinS.X.H.G.
0.6077.8Zm.7150.3.S1_atAY109249.1--2e+0At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)S.X.H.G.
0.4861.3Zm.10865.1.A1_atCF638037hypothetical protein LOC100275271-1e-6At2g44090-S.X.H.G.
0.3844.2Zm.4618.1.A1_atAW066311pre-mRNA-splicing factor ISY1-4e-7At3g18790-S.X.H.G.
0.2928.1Zm.6328.1.A1_atAY104064.1hypothetical protein LOC100279888-3e+0At4g38060unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
73.1100.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
67.4100.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
64.0100.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.998.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.298.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.098.0GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
1.989.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0003043Zm.24.2.A1_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinC.G.S.X.
1.0003043Zm.24.2.S1_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinC.G.S.X.
0.6302579Zm.24.1.S1_atM60214.1viviparous1-3e-17At3g24650ABI3 (ABA INSENSITIVE 3)C.G.S.X.
0.018e-238Zm.6915.1.S1_atAW256266hypothetical protein LOC100280116-5e-1At5g64160unknown proteinC.G.S.X.
0.018e-238Zm.1917.1.S1_atAW506675--6e-4At1g27690unknown proteinC.G.S.X.
0.018e-238Zm.13245.1.S1_atAF450481.1CBF3-like protein-2e+0At3g22800leucine-rich repeat family protein / extensin family proteinC.G.S.X.
0.018e-238Zm.10313.1.S1_atAY082396.1knotted1-interacting protein-2e-7At2g16400BLH7 (bell1-like homeodomain 7)C.G.S.X.
0.023e-136Zm.9649.1.A1_atBM337167hypothetical protein LOC100277264-1e+0At1g43720unknown proteinC.G.S.X.
0.023e-136Zm.8561.1.A1_atBM336075--1e-3At1g02070unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt2g40765818673unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, mitochondrial respiratory chain complex III;P---C.G.S.X.
0.011e+036Glycine maxPsAffx.CL241Contig1_atPsAffx.CL241Contig1--6e-1At2g46820PSI-P (PHOTOSYSTEM I P SUBUNIT)C.G.S.X.
0.066e-34145Hordeum vulgareContig10484_atContig10484--6e-10At3g24650ABI3 (ABA INSENSITIVE 3)C.G.S.X.
0.331e-71272Oryza sativaOs01g0911700AK073805.1-Transcription activator VP1-rice9e-8At3g24650ABI3 (ABA INSENSITIVE 3)C.G.S.X.
0.023e-138Populus trichocarpaPtpAffx.218566.1.S1_atpmrna34228hypothetical protein-5e+0At1g01690unknown proteinC.G.S.X.
0.243e-65250Triticum aestivumTa.42.1.S1_atAB047554.1--5e-6At3g24650ABI3 (ABA INSENSITIVE 3)C.G.S.X.
0.014e+032Vitis vinifera1616308_atCF207045.1--7e-2At1g56200emb1303 (embryo defective 1303)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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