CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2376.7.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 Zm.2376.7.A1_at BM079913 - - 2e-2 At5g60370 unknown protein S.X. H.G.
0.83 95.6 Zm.3864.1.A1_at AY106452.1 calmodulin2 - 8e-80 At3g56800 CAM3 (CALMODULIN 3) S.X. H.G.
0.73 89.9 Zm.17158.3.A1_at BM078932 - - 4e+0 At3g08920 rhodanese-like domain-containing protein S.X. H.G.
0.71 88.2 Zm.7720.1.S1_at CK347322 - - 2e-10 At2g21630 transport protein, putative S.X. H.G.
0.67 85.8 Zm.730.1.A1_at AY104952.1 hypothetical protein LOC100191862 - 4e-86 At3g46440 UXS5 S.X. H.G.
0.55 71.6 Zm.12573.1.A1_a_at BI233467 hypothetical protein LOC100192765 /// hypothetical protein LOC100276406 - 2e+0 At3g20450 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 98.5 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.9 98.3 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.8 97.2 GSM162265 Wild type 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.4 97.0 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.1 96.8 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.7 96.5 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.6 96.4 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.5 96.3 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.3 96.1 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.8 95.5 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 6e-106 383 Zm.2376.1.A1_a_at AF001634.1 physical impedance induced protein /// cortical cell-delineating protein - 6e+0 At4g38130 HD1 (HISTONE DEACETYLASE 1) C.G. S.X.
0.28 6e-106 383 Zm.2376.1.A1_x_at AF001634.1 physical impedance induced protein - 6e+0 At4g38130 HD1 (HISTONE DEACETYLASE 1) C.G. S.X.
0.28 9e-105 379 Zm.2376.6.S1_x_at CF020992 cortical cell-delineating protein - 7e-3 At5g63740 zinc finger protein-related C.G. S.X.
0.08 4e-14 77 Zm.2376.3.S1_a_at BG873775 ADP-ribosylation factor GTPase-activating protein 3 - 7e-20 At2g35210 RPA (ROOT AND POLLEN ARFGAP) C.G. S.X.
0.08 4e-14 77 Zm.2376.3.S1_at BG873775 ADP-ribosylation factor GTPase-activating protein 3 - 7e-20 At2g35210 RPA (ROOT AND POLLEN ARFGAP) C.G. S.X.
0.09 1e-8 59 Zm.2376.2.S1_x_at AY105236.1 Physical impedance induced protein - 6e+0 At3g24510 - C.G. S.X.
0.09 1e-8 59 Zm.2376.2.S1_at AY105236.1 Physical impedance induced protein - 6e+0 At3g24510 - C.G. S.X.
0.04 4e-5 48 Zm.6569.4.A1_a_at AY112282.1 40S ribosomal protein S15 - 8e-39 At5g09510 40S ribosomal protein S15 (RPS15D) C.G. S.X.
0.04 4e-5 48 Zm.6569.4.S1_a_at AY112282.1 - - 8e-39 At5g09510 40S ribosomal protein S15 (RPS15D) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 40 Arabidopsis thaliana At5g60370 836159 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;FMOPA - - - C.G. S.X.
0.04 5e-4 46 Glycine max GmaAffx.41460.1.S1_at BI946236 - - 1e+1 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.05 5e-5 48 Hordeum vulgare Contig19902_at Contig19902 - - 8e+0 At5g16120 hydrolase, alpha/beta fold family protein C.G. S.X.
0.04 7e-4 46 Oryza sativa Os05g0202800 AF009959.1 - Plant metallothionein, family 15 protein 3e-7 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.03 2e-3 44 Populus trichocarpa PtpAffx.7182.3.A1_a_at CV253214 hypothetical protein - 6e-3 At1g79390 unknown protein C.G. S.X.
0.19 1e-13 77 Triticum aestivum Ta.17478.1.S1_at CA621202 - - 3e+0 At2g10450 14-3-3 protein, putative / grf15, putative C.G. S.X.
0.03 4e-4 44 Vitis vinifera 1617182_at CB921793 - - 5e-3 At1g62240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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