Gene omics information

Query gene ID	Zm.2361.1.A1_at
Gene name	hypothetical protein LOC100191552
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.2361.1.A1_at	BM381388	hypothetical protein LOC100191552	-	3e-17	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	S.X.	H.G.	Please select
0.51	66.4	Zm.7343.1.S1_at	AF371278.1	alpha globulin	-	6e-1	At5g05230	ubiquitin-protein ligase	S.X.	H.G.	Please select
0.45	56.4	Zm.17549.2.A1_at	AW267524	hypothetical protein LOC100272329	-	3e-1	At5g14160	F-box family protein	S.X.	H.G.	Please select
0.40	48.5	Zm.18669.1.A1_at	CO521992	hypothetical protein LOC100273322	-	3e-4	At5g50840	-	S.X.	H.G.	Please select
0.34	37.2	Zm.17765.1.S1_at	CK371533	-	-	1e+0	At2g25280	-	S.X.	H.G.	Please select
0.34	37.2	Zm.4768.1.A1_at	AY107116.1	hypothetical protein LOC100192636	-	5e-30	At1g64550	ATGCN3	S.X.	H.G.	Please select
0.30	29.8	Zm.9403.1.A1_at	CK371107	ras-related protein Rab11B	-	3e-43	At3g15060	AtRABA1g (Arabidopsis Rab GTPase homolog A1g)	S.X.	H.G.	Please select
0.29	28.1	Zm.10133.1.A1_at	CD441295	ruBisCO large subunit-binding protein subunit beta	-	2e-60	At1g55490	CPN60B (CHAPERONIN 60 BETA)	S.X.	H.G.	Please select
0.28	28.1	Zm.4800.1.A1_at	CF628838	glucose-6-phosphate isomerase	-	1e-40	At4g24620	PGI1 (PHOSPHOGLUCOSE ISOMERASE 1)	S.X.	H.G.	Please select
0.26	22.7	Zm.961.1.A1_at	CA400684	LAP4 protein	-	2e+0	At2g02370	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.8	99.4	GSM206326	Upper pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
17.6	99.1	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
15.9	99.0	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
15.6	99.0	GSM206324	Upper pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
13.8	98.8	GSM206320	Lower pulvinus 15 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
13.8	98.8	GSM202278	B73 11-day seedling aerial tissue biological replicate 1	GSE8174	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
12.2	98.6	GSM206314	Upper pulvinus 15 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
11.8	98.6	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
10.1	98.4	GSM206323	Left pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.3	98.2	GSM206312	Upper pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	3e-120	430	Zm.16959.2.A1_at	CK347555	hypothetical protein LOC100274593	-	1e-13	At3g46230	ATHSP17.4	C.G.	S.X.	Please select
0.38	1e-39	163	Zm.2482.1.A1_at	BM333007	16.9 kDa class I heat shock protein 1	-	1e-4	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.29	2e-38	159	Zm.3693.1.A1_at	AI065909	16.9 kDa class I heat shock protein 1	-	3e-8	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.13	3e-9	61	Zm.3740.1.A1_at	BG840857	22.0 kDa class IV heat shock protein	-	1e-1	At4g24240	WRKY7	C.G.	S.X.	Please select
0.13	3e-9	61	Zm.18018.1.A1_at	CF637656	18.3 kDa class I heat shock protein	-	1e-1	At1g59860	17.6 kDa class I heat shock protein (HSP17.6A-CI)	C.G.	S.X.	Please select
0.03	4e-5	48	Zm.11.1.S1_at	L28712.1	heat shock protein26	-	2e+0	At1g07900	LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)	C.G.	S.X.	Please select
0.03	7e-4	44	Zm.12517.1.A1_at	CF624446	Hypothetical protein LOC100191598	-	2e+0	At4g16024	unknown protein	C.G.	S.X.	Please select
0.03	1e-2	40	Zm.11550.1.A1_at	BG320003	-	-	1e-3	At3g24590	PLSP1 (plastidic type I signal peptidase 1)	C.G.	S.X.	Please select
0.05	4e-2	38	ZmAffx.457.1.A1_at	AI677203	hypothetical protein LOC100276133	-	3e+0	At4g20470	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	3e-17	89	Arabidopsis thaliana	At1g53540	841789	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	1e-11	71	Glycine max	Gma.16005.1.S1_at	CD409510	-	-	4e-13	At5g59720	HSP18.2 (heat shock protein 18.2)	C.G.	S.X.	Please select
0.49	3e-108	391	Hordeum vulgare	Contig2012_s_at	Contig2012	-	-	2e-21	At3g46230	ATHSP17.4	C.G.	S.X.	Please select
0.48	3e-102	373	Oryza sativa	Os03g0267000	AU165294	-	Low molecular mass heat shock protein Oshsp18.0	6e-3	At5g59720	HSP18.2 (heat shock protein 18.2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	1e-7	57	Populus trichocarpa	PtpAffx.21139.1.S1_at	BU889382	hypothetical protein	-	2e-15	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.47	8e-132	470	Triticum aestivum	Ta.4427.1.S1_at	CD491093	-	-	7e-9	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	C.G.	S.X.	Please select
0.22	4e-20	97	Vitis vinifera	1616145_a_at	BQ794473	hypothetical protein LOC100261583	-	1e-3	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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