Gene omics information

Query gene ID Zm.2298.2.A1_a_at
Gene name hypothetical protein LOC100192687
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6Zm.2298.2.A1_a_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeS.X.H.G.
0.5065.7Zm.4905.1.S1_atAY106392.1hypothetical protein LOC100272547-1e-14At4g27120unknown proteinS.X.H.G.
0.4759.9Zm.2525.1.A1_atBM380204germin-like protein subfamily 1 member 11-3e-2At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)S.X.H.G.
0.3742.3Zm.537.1.A1_a_atAI065500hypothetical protein LOC100194026 /// hypothetical protein LOC100273405-1e-55At4g02930elongation factor Tu, putative / EF-Tu, putativeS.X.H.G.
0.3538.9Zm.6848.3.S1_atAW562823--5e-12At1g09640elongation factor 1B-gamma, putative / eEF-1B gamma, putativeS.X.H.G.
0.3538.9Zm.5566.1.A1_a_atAI461543hypothetical protein LOC100193873 /// mitochondrial ATP synthase-5e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)S.X.H.G.
0.2724.6Zm.17224.1.S1_s_atBM500725--2e-11At3g55870anthranilate synthase, alpha subunit, putativeS.X.H.G.
0.2724.6Zm.2859.1.A1_a_atBM351067alcohol dehydrogenase2-2e-11At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)S.X.H.G.
0.2216.9Zm.3136.1.A1_atCF625170hypothetical protein LOC100192461-9e-66At4g13930SHM4 (serine hydroxymethyltransferase 4)S.X.H.G.
0.1912.8Zm.15183.1.A1_atBM334953--1e+0At2g25770unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.299.3GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
15.999.0GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
13.198.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.896.6GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.896.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.496.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.396.1GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.296.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9602785Zm.2298.2.A1_x_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.9602785Zm.2298.2.A1_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.256e-52204Zm.12842.1.A1_atCA401932hydroxyacid oxidase 1-1e-2At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.204e-1685Zm.2250.1.A1_atBM378785hypothetical protein LOC100279535-2e+0At3g14250protein binding / zinc ion bindingC.G.S.X.
0.075e-342Zm.12269.1.A1_atCF646230hypothetical protein LOC100193070-7e+0At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.013e-136Zm.18303.1.A1_atCF638221hypothetical protein LOC100194374 /// hypothetical protein LOC100216708-5e-5At1g08370DCP1 (decapping 1)C.G.S.X.
0.013e-136Zm.18303.1.A1_x_atCF638221hypothetical protein LOC100216708-5e-5At1g08370DCP1 (decapping 1)C.G.S.X.
0.021e+034ZmAffx.270.1.A1_atAI670398--8e-1At4g02730transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.021e+034ZmAffx.270.1.S1_atAI670398--8e-1At4g02730transducin family protein / WD-40 repeat family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.291e-21105Arabidopsis thalianaAt3g14420820665(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity;P:metabolic process;C:in 7 components;OBFMPA---C.G.S.X.
0.177e-550Glycine maxGmaAffx.74224.1.S1_atBQ629600peroxisomal glycolate oxidase-5e-18At4g18360(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.620860Hordeum vulgareContig8976_atContig8976--1e-20At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.630989Oryza sativaOs04g0623500AK068638.1-(S)-2-hydroxy-acid oxidase, peroxisomal (EC1.1.3.15) (Glycolate oxidase) (GOX) (Short chainalpha-hydroxy acid oxidase)7e-29At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.181e-21105Populus trichocarpaPtp.6667.1.S1_s_atCX185361hypothetical protein-9e-108At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.580791Triticum aestivumTa.10548.1.S1_atCD908152--5e-5At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.213e-31135Vitis vinifera1622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage