CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2298.2.A1_a_at

Gene name hypothetical protein LOC100192687

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 71.6 Zm.2298.2.A1_a_at BQ619139 hypothetical protein LOC100192687 - 1e-21 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
0.50 65.7 Zm.4905.1.S1_at AY106392.1 hypothetical protein LOC100272547 - 1e-14 At4g27120 unknown protein S.X. H.G.
0.47 59.9 Zm.2525.1.A1_at BM380204 germin-like protein subfamily 1 member 11 - 3e-2 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) S.X. H.G.
0.37 42.3 Zm.537.1.A1_a_at AI065500 hypothetical protein LOC100194026 /// hypothetical protein LOC100273405 - 1e-55 At4g02930 elongation factor Tu, putative / EF-Tu, putative S.X. H.G.
0.35 38.9 Zm.6848.3.S1_at AW562823 - - 5e-12 At1g09640 elongation factor 1B-gamma, putative / eEF-1B gamma, putative S.X. H.G.
0.35 38.9 Zm.5566.1.A1_a_at AI461543 hypothetical protein LOC100193873 /// mitochondrial ATP synthase - 5e-1 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) S.X. H.G.
0.27 24.6 Zm.17224.1.S1_s_at BM500725 - - 2e-11 At3g55870 anthranilate synthase, alpha subunit, putative S.X. H.G.
0.27 24.6 Zm.2859.1.A1_a_at BM351067 alcohol dehydrogenase2 - 2e-11 At1g77120 ADH1 (ALCOHOL DEHYDROGENASE 1) S.X. H.G.
0.22 16.9 Zm.3136.1.A1_at CF625170 hypothetical protein LOC100192461 - 9e-66 At4g13930 SHM4 (serine hydroxymethyltransferase 4) S.X. H.G.
0.19 12.8 Zm.15183.1.A1_at BM334953 - - 1e+0 At2g25770 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.2 99.3 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
15.9 99.0 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
13.1 98.7 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
7.3 97.8 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1 96.8 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4 96.2 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3 96.1 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.2 96.0 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 2785 Zm.2298.2.A1_x_at BQ619139 hypothetical protein LOC100192687 - 1e-21 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.96 0 2785 Zm.2298.2.A1_at BQ619139 hypothetical protein LOC100192687 - 1e-21 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.25 6e-52 204 Zm.12842.1.A1_at CA401932 hydroxyacid oxidase 1 - 1e-2 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.20 4e-16 85 Zm.2250.1.A1_at BM378785 hypothetical protein LOC100279535 - 2e+0 At3g14250 protein binding / zinc ion binding C.G. S.X.
0.07 5e-3 42 Zm.12269.1.A1_at CF646230 hypothetical protein LOC100193070 - 7e+0 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.01 3e-1 36 Zm.18303.1.A1_at CF638221 hypothetical protein LOC100194374 /// hypothetical protein LOC100216708 - 5e-5 At1g08370 DCP1 (decapping 1) C.G. S.X.
0.01 3e-1 36 Zm.18303.1.A1_x_at CF638221 hypothetical protein LOC100216708 - 5e-5 At1g08370 DCP1 (decapping 1) C.G. S.X.
0.02 1e+0 34 ZmAffx.270.1.A1_at AI670398 - - 8e-1 At4g02730 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 1e+0 34 ZmAffx.270.1.S1_at AI670398 - - 8e-1 At4g02730 transducin family protein / WD-40 repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 1e-21 105 Arabidopsis thaliana At3g14420 820665 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative F:glycolate oxidase activity;P:metabolic process;C:in 7 components;OBFMPA - - - C.G. S.X.
0.17 7e-5 50 Glycine max GmaAffx.74224.1.S1_at BQ629600 peroxisomal glycolate oxidase - 5e-18 At4g18360 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.62 0 860 Hordeum vulgare Contig8976_at Contig8976 - - 1e-20 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.63 0 989 Oryza sativa Os04g0623500 AK068638.1 - (S)-2-hydroxy-acid oxidase, peroxisomal (EC1.1.3.15) (Glycolate oxidase) (GOX) (Short chainalpha-hydroxy acid oxidase) 7e-29 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.18 1e-21 105 Populus trichocarpa Ptp.6667.1.S1_s_at CX185361 hypothetical protein - 9e-108 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.58 0 791 Triticum aestivum Ta.10548.1.S1_at CD908152 - - 5e-5 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.21 3e-31 135 Vitis vinifera 1622249_at CA817903 glycolate oxidase-like - 6e-153 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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