Gene omics information

Query gene ID Zm.2279.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6381.1Zm.2279.1.S1_atBF728020--2e-2At3g54010PAS1 (PASTICCINO 1)S.X.H.G.
0.4759.9Zm.19158.1.A1_atAY103871.1hypothetical protein LOC100273021-1e-4At5g16400ATF2S.X.H.G.
0.4048.5Zm.1241.1.A1_atAY111716.1fiber protein Fb34-6e+0At4g24240WRKY7S.X.H.G.
0.3641.3Zm.5551.1.A1_a_atAY110434.1--6e-1At1g63820-S.X.H.G.
0.3233.4Zm.6023.1.S1_atAY059648.1alternative oxidase AOX3 precursor-1e-5At1g32350AOX1D (alternative oxidase 1D)S.X.H.G.
0.2318.6ZmAffx.474.1.S1_atAI677507--8e+0Atcg00440-S.X.H.G.
0.147.7Zm.2447.1.A1_atBM079996--2e+0At3g19140protein binding / zinc ion bindingS.X.H.G.
0.115.3Zm.19103.1.S1_atCF625279hypothetical protein LOC100193224-3e+0At4g09490RNase H domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.399.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.999.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.698.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.098.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.297.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM253271ZM_4.5d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.396.1GSM253246ZM_12h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.419e-101365Zm.4216.1.A1_atAW066666peptidyl-prolyl isomerase PASTICCINO1-2e-9At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
0.024e-134Zm.7579.1.A1_atCO520294hypothetical protein LOC100276241-3e+0At4g29020glycine-rich proteinC.G.S.X.
0.024e-134Zm.181.1.A1_atAY243800.1transmembrane protein-3e-12At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.034e-134Zm.17969.1.A1_atCK827261--5e+0At4g38360unknown proteinC.G.S.X.
0.022e+032Zm.781.1.S1_atAY106923.1hypothetical protein LOC100192065-2e-4At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)C.G.S.X.
0.037e+030Zm.8926.2.S1_atBM350553Hypothetical protein LOC100192920-3e-1At4g15150glycine-rich proteinC.G.S.X.
0.027e+030Zm.8926.1.S1_atBE051229hypothetical protein LOC100192920-4e-1At4g15150glycine-rich proteinC.G.S.X.
0.037e+030Zm.8926.2.S1_x_atBM350553Hypothetical protein LOC100192920-3e-1At4g15150glycine-rich proteinC.G.S.X.
0.017e+030Zm.731.1.A1_atCA404803--1e-22At4g26600nucleolar protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-240Arabidopsis thalianaAt3g54010824568PAS1 (PASTICCINO 1)Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced.---C.G.S.X.
0.102e-1169Glycine maxGmaAffx.78290.1.S1_atBM528728--8e-37At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
0.131e-32139Hordeum vulgareContig10007_atContig10007--5e-12At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
0.091e-1791Oryza sativaOs03g0367000AK065282.1-Pasticcino 1-A7e-21At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.73710.1.S1_atCX180923white-brown-complex ABC transporter family-4e-22At2g01320ABC transporter family proteinC.G.S.X.
0.252e-27123Triticum aestivumTa.5970.1.A1_atBQ295334--3e-2At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
0.041e+032Vitis vinifera1611681_atCF513131hypothetical protein LOC100241604-4e+0At5g39360EDL2 (EID1-like 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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