Gene omics information

Query gene ID Zm.2269.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6582.1Zm.2269.1.S1_atCF631922--1e-7At5g51820PGM (PHOSPHOGLUCOMUTASE)S.X.H.G.
0.8696.3Zm.17694.1.S1_atCK370322--5e+0At3g2223060S ribosomal protein L27 (RPL27B)S.X.H.G.
0.6785.8Zm.2267.1.S1_a_atAY105804.1hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)S.X.H.G.
0.6785.8ZmAffx.283.1.S1_atAI670414--3e+0At3g23175lesion inducing protein-relatedS.X.H.G.
0.5674.4Zm.2267.1.A1_atAY105804.1Hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)S.X.H.G.
0.5674.4ZmAffx.57.1.S1_atAI665066--1e+1At3g43083LCR33 (Low-molecular-weight cysteine-rich 33)S.X.H.G.
0.5267.3Zm.11993.1.A1_atBM382482--4e+0At3g26980MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)S.X.H.G.
0.5166.4Zm.9670.2.A1_a_atAY110378.1--4e-4At1g60660CB5LP (CYTOCHROME B5-LIKE PROTEIN)S.X.H.G.
0.4961.9Zm.18083.2.A1_atCK985909--1e-12At2g38670PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1)S.X.H.G.
0.4658.4ZmAffx.788.1.A1_atAI759113--8e-1At4g33925unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.799.1GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.798.3GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.297.4GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.296.9GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM253264ZM_4d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.996.7GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
4.796.5GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.696.4GSM253263ZM_4d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-134Zm.18383.1.A1_atAY110186.1delta(14)-sterol reductase-4e-18At3g52940FK (FACKEL)C.G.S.X.
0.026e-134Zm.16237.1.A1_atCF624893--5e-13At2g30110ATUBA1C.G.S.X.
0.023e+032Zm.9517.1.A1_atBM269495--2e+1Atmg00630-C.G.S.X.
0.023e+032Zm.4824.1.A1_x_atCD446403hypothetical protein LOC100273118-5e-23At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
0.033e+032Zm.4824.6.A1_a_atAI66556640S ribosomal protein S3a-2e-13At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
0.033e+032Zm.4824.7.S1_x_atAI77041440S ribosomal protein S3a-2e-13At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
0.023e+032Zm.4824.4.A1_atAW017540--5e-13At4g3467040S ribosomal protein S3A (RPS3aB)C.G.S.X.
0.033e+032Zm.4824.6.S1_a_atAI665566--2e-13At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
0.013e+032Zm.4793.2.A1_atCF049001hypothetical protein LOC100193728-1e-40At1g19880regulator of chromosome condensation (RCC1) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-757Arabidopsis thalianaAt5g51820835257PGM (PHOSPHOGLUCOMUTASE)Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.---C.G.S.X.
0.123e-550Glycine maxGma.7477.1.A1_atCD392764--1e-32At5g51820PGM (PHOSPHOGLUCOMUTASE)C.G.S.X.
0.031e+130Hordeum vulgareContig18752_atContig18752--4e-6At4g16510YbaK/prolyl-tRNA synthetase-relatedC.G.S.X.
0.271e-104381Oryza sativaOs10g0189100AK064893.1-Phosphoglucomutase/phosphomannomutase familyprotein3e-41At5g51820PGM (PHOSPHOGLUCOMUTASE)C.G.S.X.
0.321e-1067Populus trichocarpaPtpAffx.130948.1.S1_atBU832171hypothetical protein-2e-114At5g51820PGM (PHOSPHOGLUCOMUTASE)C.G.S.X.
0.042e+034Triticum aestivumTaAffx.54294.1.S1_atCA683327--3e-2At1g58330ZW2C.G.S.X.
0.032e+032Vitis vinifera1611411_atCF209025--8e-1At4g23103unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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