Gene omics information

Query gene ID Zm.2263.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.2263.1.A1_atAW330859--7e-5At2g43050ATPMEPCRDS.X.H.G.
0.6785.8Zm.13797.2.A1_atAY105820.1hypothetical protein LOC100279789-8e-4At3g20770EIN3 (ETHYLENE-INSENSITIVE3)S.X.H.G.
0.6179.5Zm.1404.1.A1_atAY108922.1sugar transport protein 5-7e+0At2g37585glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinS.X.H.G.
0.5065.7Zm.12848.1.A1_atAW037142hypothetical protein LOC100273763-5e-1At1g18780zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4455.7Zm.2925.3.A1_atCF002413Ubiquitin-4e-41At2g47110UBQ6S.X.H.G.
0.1912.8Zm.17843.2.A1_atCD999046hypothetical protein LOC100216964-6e-1At2g47910CRR6 (chlororespiratory reduction 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.6100.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
42.299.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.799.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.699.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.399.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.698.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.398.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.598.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.498.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.198.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-1579Zm.12262.1.S1_atCA826732--5e-2At3g06830pectinesterase family proteinC.G.S.X.
0.025e-444Zm.16340.1.A1_atCA402857DNA binding protein-1e-2At2g45430DNA-binding protein-relatedC.G.S.X.
0.052e-342ZmAffx.888.1.A1_atAI770836--9e-3At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.052e-342ZmAffx.888.1.S1_atAI770836hypothetical protein LOC100277924-9e-3At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.032e-342Zm.3885.1.S1_atCK145224Pectin methylesterase1-6e-2At3g06830pectinesterase family proteinC.G.S.X.
0.042e-342Zm.12657.1.A1_atCA826570--1e-1At1g11580PMEPCRA (METHYLESTERASE PCR A)C.G.S.X.
0.031e-136Zm.9892.1.A1_atBM351413--6e-3At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)C.G.S.X.
0.021e-136Zm.7336.1.A1_atAF371263.1hypothetical protein LOC100279133 /// 50kD gamma zein-2e-3At1g30460CPSF30C.G.S.X.
0.021e-136Zm.6874.2.S1_a_atCF637577hypothetical protein LOC100193230-3e-3At2g45430DNA-binding protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-548Arabidopsis thalianaAt2g43050818907ATPMEPCRDF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM---C.G.S.X.
0.052e-344Glycine maxPsAffx.psHB012xF21f_s_atPsAffx.psHB012xF21f--9e-25At2g19520FVEC.G.S.X.
0.041e-136Hordeum vulgareContig18153_atContig18153--4e+0At5g63440unknown proteinC.G.S.X.
0.179e-40165Oryza sativaOs03g0399000AK069492.1-Pectinesterase family protein1e-3At3g06830pectinesterase family proteinC.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.217886.1.S1_atpmrna33332hypothetical protein-1e-2At4g13420HAK5 (HIGH AFFINITY K+ TRANSPORTER 5)C.G.S.X.
0.062e-240Triticum aestivumTa.3826.1.S1_atBJ254574--2e-3At2g47040VGD1 (VANGUARD1)C.G.S.X.
0.043e-134Vitis vinifera1620881_atCF568956--3e-4At5g54900ATRBP45A (RNA-binding protein 45A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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